Kosakonia pseudosacchari: IP581_17005
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Entry
IP581_17005 CDS
T06897
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpse03009
]
IP581_17005 (srmB)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
IP581_17005 (srmB)
Ribosome biogenesis [BR:
kpse03009
]
Prokaryotic type
rRNA helicases
IP581_17005 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
QOV62944
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All DBs
Position
3622128..3623462
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AA seq
444 aa
AA seq
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MTVTTFSELELDDSLLDALQSKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKSFAERLLEDPVEVSATPSTRERKKIHQWYYRADDVAHKTALLV
HLLKQPEVSRSIVFVRKRERVHELANWLREAGINNCYLEGEMVQAKRNEAIKRLTEGRVN
VLVATDVAARGIDIDDVSHVFNFDLPRSGDTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
GKIGRYVEEPLKPRVIDELRAKTRAPSEKLTGKPSKKVLAKRAEKKKEKEKEKPRVKQRH
RDTKNIGKRRKPSAASTAPQNTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaacttgacgacagcctgctggacgcgctccag
agtaaaggctttacacgcccgaccgccatccaggccgccgccattccgcctgcgcttgaa
gggcgtgatgtcctcggttccgcccctaccggcaccggtaaaacagcggcatatctgctg
cctgcgttgcagcatcttctggacttcccacgtaaaaaatccggcccaccgcgcatcctg
atcctgacgccgacccgcgaactggcgatgcaggttgccgatcacgcgcgtgagcttgcc
gctaacacgcatctggatatcgccaccattaccggcggtgtagcgtatatgaaccacgcg
gaagtgttcagcgaaaaccaggatatcgtggtcgcgaccactggccgcctgctgcaatat
attaaggaagagaacttcgactgccgcgcggtagagacgctgatccttgacgaagcagac
cgcatgctggacatgggcttcgcgcaagatattgagcacattgccggtgaaacccgctgg
cgcaagcagaccatgctgttctccgcgacgctggaaggcgacgccattaaaagctttgcc
gagcgcctgctggaagatcctgtcgaagtttccgccacgccatcaacgcgcgagcgcaag
aaaattcaccagtggtactaccgtgccgatgacgtcgcacataaaaccgcgctgctggtg
catctgctcaagcaacctgaagtaagtcgttctattgtgtttgtgcgcaaacgcgagcgt
gtgcatgagctggcaaactggctgcgtgaagcgggcattaacaactgctatctcgaaggt
gagatggtgcaggcgaagcgtaacgaagcgatcaaacgcctgacggaaggtcgtgtgaat
gtgctggtcgccaccgatgtcgctgctcgcggcattgatatcgatgatgtcagccacgtc
tttaacttcgatctgccgcgcagcggcgatacctacctgcaccgcatcggtcggacgggt
cgtgcaggtcgtaaaggcactgcgatttcgctggtcgaagcgcacgatcatctgttgctg
ggtaaaatcggtcgttatgttgaagagccgctgaagccgcgcgtgatagacgaattgcgt
gcgaaaacgcgcgcgcccagtgaaaagctgacaggcaaaccgtcgaagaaagtgctggcg
aaacgggcagagaagaaaaaagagaaagaaaaagagaagccgcgtgtgaaacaacgccat
cgtgacaccaaaaacattggtaaacggcgtaagccgagcgctgcaagtactgcgccgcaa
aatacagaagagtaa
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