Kosakonia pseudosacchari: IP581_18460
Help
Entry
IP581_18460 CDS
T06897
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpse03016
]
IP581_18460 (truD)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
IP581_18460 (truD)
Transfer RNA biogenesis [BR:
kpse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IP581_18460 (truD)
Prokaryotic type
IP581_18460 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QOV63214
LinkDB
All DBs
Position
complement(3905384..3906433)
Genome browser
AA seq
349 aa
AA seq
DB search
MTDFDNLTFLHGKPVASGVLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGNAMPDLSAFQLEGCKVLEYARHKRK
LRLGALQGNAFTLVLREISDCADVEARLQAIAQKGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSTRLKKTDFNQVVDGDALQLAGRGSWFVATREE
QAELQTRVEAKTLMITASLPGCGEWGTQRDALAFEQQAVADAPELQALLVREKVEAARRA
MLLYPQKLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagattttgataacctgacatttttgcacggcaaaccggtggcaagcggcgttctg
aaagccaatccggaagatttcgtggtggtggaagatcttggctttgaacctgatggcgaa
ggcgaacatattctggtgcgcatcctgaaaaatggctgcaatacgcgttttgtggctgat
gcgctggcaaaattccttaaaatccatgcgcgtgaagtgagcttcgccgggcaaaaagat
aaacacgctgtcactgagcagtggctgtgtgcccgcgtgccgggtaatgcgatgcccgat
ctcagcgcatttcagctggaaggctgcaaagtgctggagtacgcccgccacaagcgcaag
ctgcgcctcggtgcgctgcagggcaatgcgtttacgctggtgctgcgcgaaatcagcgac
tgtgcggatgttgaggcgcgtttgcaggccatcgcacagaaaggtgtaccgaattatttc
ggcgctcagcgctttggcatcggcggcagcaacctgcaaggcgcgcttcgctgggcgcag
agcgatgcaccggtgcgcgatcgtaacaagcgcagtttttggttgtcggcagcgcgcagc
gcgttgtttaatcaaatcgtcagcacgcgattgaaaaaaacagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgcggcagctggtttgtggcaacccgtgaagag
caggcggaactgcaaacgcgcgttgaggcgaaaacgctgatgattaccgcatcgctgcca
ggctgcggtgagtggggcacacagcgtgacgcgctggcgtttgaacaacaggcggttgct
gatgcgcctgagctacaggcgctgctggtgcgggagaaagtcgaagccgcgcgccgcgcg
atgctgctctacccgcaaaaattaagctggaactggtgggatgacgtcaccgtcgaatta
cggttctggcttccggcgggcagttttgctaccagtgtcgtcagggaacttattaacaca
tcgggtgattatgcgaatattgctgagtaa
DBGET
integrated database retrieval system
