Kosakonia pseudosacchari: IP581_18575
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Entry
IP581_18575 CDS
T06897
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
IP581_18575 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpse03400
]
IP581_18575 (recB)
Enzymes [BR:
kpse01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
IP581_18575 (recB)
DNA repair and recombination proteins [BR:
kpse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
IP581_18575 (recB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QOV63234
LinkDB
All DBs
Position
complement(3926337..3929885)
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AA seq
1182 aa
AA seq
DB search
MRETTAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSAAYPRPLSVEEL
LVVTFTEAATEELRGRIRSNIHELRIACLRETTDNPLYARLLDEIADKQQAAHWLLLAER
QMDEAAIFTIHGFCQRMLSLNAFESGMLFELQLLEDESLLRYQACADFWRRHCYPLTREI
AEVIHASWKGPQDLLKAIDRYLQGETPQIKAPPAADETLASRHQQIIAQIDEVKRQWSAG
VNEIEPLLENSGIDRRKFNRGNQAKWIEKISTWAQEETRSYLLPDALEKFTQSFLIERTK
PDGVVPEHPLFVAIENLLAQSLTLNDLVLTSAMREIRETVAKEKRRRGELGFDDMLSRLD
DALRSPNGEALAAAIRSRFPVAMIDEFQDTDPQQYRIFSRIWLKQPDCGLLLIGDPKQAI
YAFRGADIFTYMKARDEVSARYTLDTNWRSSPGMIASVNQLFSRMDDAFMFRQIPFLPVK
PAAKNAGLRFAYQGETQPAMKLWLMEGDGVSVGDYQGFMAQLCAAQIRDWLSAGLRGEAL
LYEGENARPVKASDITVLVRSRHEASLIRDALTLLNIPSVYLSNRDSVFETPEAQELLWL
LQAVLAPERESTLRSALATSLLGLTALDIDALNQNELAWDEIVEEFSGYRELWQKRGVMA
MLRMLMSARHVAENLLATPGGERRLTDILHISELLQEAGTQLESEHALTRWLAQRIAEPN
ANASSEQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFIANFRIQDQGFYHDRDSFAAVLD
LSHAEESVALAEAERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGEKTGASDFHQSALG
RLLQKGEALDAAALRNVLQQLCNDDIDLCIPSMPDAERWQLPQTESPTLSVREITRCISD
DWRVTSYSGLQQRAHGIAQDLLPRLDIDAAGEREALQEPVLTPHQFPRGAAPGTFLHSLF
EDLDFTQPVADAWVEEKLLAGGYEAHWQPVLSRWLETVLHVPLAQTGISLSQLTNKEKQV
EMEFYLPISATLSAEALDELIRRYDPLSAGCPPLDFRDVRGMLKGFIDLVFRHNGRYYLL
DYKSNWLGESAEAYTQAAMAAAMQSHRYDLQYQLYSLALHRFLRHRIAGYDYEHHFGGVI
YLFLRGVDAQNPQQGIFTIRPDVELITQMDDLFAGVAPEVAP
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaacgaccgctgagacccttgatcccctgcgcttgccgctcaccggcgagcgc
ttgattgaagcctcggcgggcactggtaaaacttttaccattgccgcgctctatttacgg
ctgctattagggttaggcggtagcgccgcctacccgcgcccgctcagcgttgaagaactg
ctggtggtgactttcaccgaggccgcgacagaagagctgcgcggccgcattcgcagtaac
atccatgagttgcgcattgcttgcctgcgcgaaacaaccgataacccgctgtacgcacgt
ctgctggatgagattgccgataagcaacaggcggcgcactggttgttgctggccgagcgg
caaatggacgaagcggcaatctttacgatccacggtttttgccagcgcatgctgagcctg
aatgcctttgaatccggcatgctgtttgaactgcaactgctggaagatgagtcgctgttg
cgttaccaggcctgtgcggatttctggcgtcgccactgctacccgctgacgcgtgaaatt
gctgaagtcatccatgcttcgtggaaggggccgcaggatctgctgaaagcgatcgatcgt
tatctgcaaggggaaacgccgcaaataaaagcgccgccagcggcggacgaaacgctggcc
tcgcgccatcagcaaattattgcgcagattgacgaggtgaagcgtcagtggagcgctggc
gtcaatgaaatcgagccactgctcgaaaattccggtattgatcggcgtaaattcaatcgc
ggcaaccaggcgaagtggatcgaaaaaatctccacctgggcgcaggaagagacccgcagc
tacctgttgccggacgcgctggaaaaattcactcagtcctttcttattgaacgtactaaa
cccgacggcgtggtaccggaacacccgctttttgtcgccatcgaaaacttactggcgcag
tcattaacgcttaacgatctggtgttgaccagcgcaatgcgtgagattcgtgaaacggtg
gcaaaagagaaacgccggcgcggcgaactgggctttgacgatatgctcagccgtcttgat
gatgccctgagaagcccgaacggcgaagcgttagccgcggcaatccgcagccgtttcccg
gtcgcgatgatcgatgagtttcaggataccgacccgcaacagtaccgtatttttagccgc
atctggttgaaacagccggattgcggtttattgctgattggcgatccaaaacaggccatt
tacgcgtttcgcggcgcggatattttcacctatatgaaagcgcgcgatgaagtgagcgcc
cgctatacgctggataccaactggcgctcgtcgcctggcatgattgccagcgtcaaccag
ctcttcagccggatggacgatgcctttatgtttcgtcagatcccgtttctgccggtaaaa
cccgccgccaaaaacgcaggcttacgctttgcgtatcaaggggaaacgcagccggcgatg
aagctgtggctgatggaaggtgatggtgtaagcgtcggggattatcagggttttatggcg
cagttatgcgcagcacaaatccgcgactggctgagcgccgggctgcggggcgaagcactg
ctgtatgaaggggaaaatgcgcgaccggtaaaagcgtcggatattaccgtgctggtgcgc
agccgccatgaagcctcgcttatccgcgatgcgttgacgttactgaatattccatctgtg
tacctttccaaccgcgacagcgtttttgaaacaccggaagcacaggagttgctgtggcta
ttgcaggcggtgcttgcaccagagcgcgaaagtacgctgcgcagtgcgctggcgacatcc
ttgctggggcttaccgcgctggatattgatgcgctcaaccagaatgagctggcgtgggat
gagatcgtcgaagagttttccggctatcgcgagctgtggcaaaaacgtggtgtgatggcg
atgctgcgcatgctgatgagtgcgcgacacgtggcagaaaacttactggcaacccccggc
ggtgaacgacggctgacagatatcctgcacatcagcgagttgttgcaggaagcaggtacg
caactggaaagtgaacacgcgcttacccgctggctggcgcagcgtatcgccgaaccgaat
gccaatgcatcaagcgagcaactgcggctggagagcgataaacacctggtgcagattgtc
accatccacaaatcgaaagggctggagtatccgctggtctggctgccgtttatcgctaat
ttccgcattcaggatcagggcttttaccacgatcgcgactcttttgccgccgtgctcgat
ctcagccatgccgaagagagcgtcgcgctggcggaagcggagcgtctggctgaagacctg
cgtttactgtacgtggcgttgacgcgttcggtctggcattgcagtttaggggttgcgccg
ctgtttcgtcgccgtggcgaaaaaaccggagccagtgattttcaccagagcgcgctgggg
cggcttctgcaaaagggcgaagcgctggatgccgccgcgttgcgtaacgttttgcagcaa
ctgtgcaatgacgatatcgacctttgtattccttccatgccggacgccgagcgctggcag
ctgccgcaaacagaatcaccgacgctgagcgtgcgtgaaatcacgcggtgcatcagcgat
gactggcgtgtcaccagttattccgggttgcagcagcgtgctcatggcatcgctcaggat
ctgctgccgcgtctggatattgacgcagccggagagcgagaggcgttgcaagagccggta
ttaacgccgcaccagttcccacgcggcgcggcgccgggaacatttttgcatagcttgttt
gaggacctggattttacgcagccggtggctgacgcctgggttgaagaaaaattactggcg
ggcggttacgaagcacactggcagccggtgctaagccgctggctggaaaccgtgctacat
gtgccgctggcgcaaacgggcatctccctgagccaactgacgaacaaagagaaacaggtg
gagatggagttttacctgccgattagcgccacgctgagcgcggaggcgctggatgaactc
atccggcgttatgatccgctgtcggctggctgcccaccgctcgattttcgcgatgtgcgt
ggcatgttgaaagggtttatcgacctggtgtttcgccacaacgggcgttattacctactg
gattataaatccaactggctgggcgaaagcgccgaagcttacacgcaagccgccatggcg
gcggcaatgcagtcgcaccgctacgacttgcagtaccagctttacagcctggcgctgcac
cgctttttgcgccatcgcattgccggctacgattacgaacaccattttggcggcgtgatt
tatctgttcctgcgtggtgtggatgcgcaaaatccgcagcaggggattttcactatccgg
cctgatgttgaattgattacacaaatggacgacctgttcgcaggcgttgcgccggaggtt
gcgccatga
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