Kosakonia pseudosacchari: IP581_18755
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Entry
IP581_18755 CDS
T06897
Name
(GenBank) PD40 domain-containing protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse00040
Pentose and glucuronate interconversions
kpse01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
IP581_18755
Enzymes [BR:
kpse01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
IP581_18755
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
PD40
PolyG_pol
Motif
Other DBs
NCBI-ProteinID:
QOV63269
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All DBs
Position
3970610..3971785
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AA seq
391 aa
AA seq
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MAKGMRVKLNYAISRDPDTGAEVTRLTPPEVTCHRNYFYQKCFFNDGSHLLFAGEFDGHW
NYYLLDIAKAEAVQLTEGAGDNTFGGFLSPDDSALYYVKNDRTLREVNLQTLAEREIYRV
PDEWVGYGTWVANSDCSKLVGIEIAASDWTPLNDWKLFHDFFHKGPHCRLLRVDLQSGES
SVIHEEKNWLGHPIYRPFDDNTVAFCHEGPHDLVDARMWLVNEDGSHVRKVKDHAEGESC
THEFWVPNGSALVYVSYLKGKQGRMIYSFNPDTGVNDAVMPMPACSHLMSNFDGTLLVGD
GSGTPVDVKDTSGYTIDNDPYLYVFDVAKKAYFRVARHDTSWATVANSRQVTHPHPSFTP
DDSAILFSSDKDGKPALYIAKLPEQRVMLQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaggcatgcgggtaaaactcaattacgcaatcagccgcgatccggataccggc
gcggaagtcacccgcttaacaccaccggaagtaacctgccaccggaactacttctatcag
aagtgttttttcaatgatggcagccacctgttgtttgccggtgaatttgatggccactgg
aattattacctgctggatatcgcgaaagccgaagccgtgcagttaacggaaggcgcgggc
gataacacctttggtggtttcctctcgccggatgacagcgctttatattatgtgaagaac
gatcgcacgctgcgcgaagtgaatttgcagacgctcgccgagcgcgaaatttatcgcgta
ccggatgagtgggtcggctacggcacctgggtggcgaacagtgattgcagcaaactggtt
gggattgagatcgccgccagcgactggacgccgctcaatgactggaaactgttccacgat
ttcttccataaaggcccgcactgccgtctgctgcgcgtagatctgcaaagcggcgagagc
agcgtgatccatgaagagaagaactggctgggtcatccgatctatcgcccgttcgacgac
aacacggtggcgttttgccacgaaggcccacacgatctggtggatgcgcggatgtggctg
gtcaatgaagacggcagccatgtacgcaaagtaaaagatcacgccgaaggcgaaagctgt
acccacgaattctgggtgccgaacggttccgcgctggtgtacgtctcttacctgaaaggt
aaacaggggcgcatgatttacagcttcaacccggataccggcgtgaacgacgcggtcatg
ccgatgccggcgtgctctcacctgatgagcaactttgacggcacattgctggttggcgat
ggttccggcacgccagtagatgtgaaagataccagcggttacaccattgataacgatccc
tatttgtatgttttcgatgtggcgaaaaaagcctacttccgcgtggcgcgccacgatact
tcctgggcaacggttgccaacagccgccaggtaacgcatccgcatccctcgttcacaccg
gacgacagtgcgattctgtttagttccgataaagacggtaagccggcgctttatatcgcg
aaacttcctgagcaacgcgtcatgttgcaagcgtaa
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