Kosakonia pseudosacchari: IP581_20450
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Entry
IP581_20450 CDS
T06897
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kpse
Kosakonia pseudosacchari
Pathway
kpse03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IP581_20450 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpse03019
]
IP581_20450 (pnp)
03016 Transfer RNA biogenesis [BR:
kpse03016
]
IP581_20450 (pnp)
Enzymes [BR:
kpse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
IP581_20450 (pnp)
Messenger RNA biogenesis [BR:
kpse03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
IP581_20450 (pnp)
Transfer RNA biogenesis [BR:
kpse03016
]
Prokaryotic type
tRNA degradation factors
IP581_20450 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
S1_RRP5
aRib
KH-I_KHDC4-BBP
Spt6_S1
KH_SLS1_2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
QOV63582
LinkDB
All DBs
Position
complement(4315625..4317760)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKASKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHDQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQIIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKHAIRRIEEITAEIEVGRVYSGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQTQPAEASEAPQAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcgttcgtaaattccagtatggtcaacataccgtcacgctggaaacc
ggcatgatggcgcgtcaggcgactgctgccgttatggtaagcatggatgacaccgcagta
ttcgtgaccgttgttggccagaaaaaagcaaaaccaggtcaggatttcttcccgctgacc
gtaaactatcaagagcgtacttacgctgccggtaaaatccctggcggtttcttccgtcgt
gaaggccgtccgagcgaaggcgaaacgctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaagggttcgtgaacgaagtgcaggttatcgctaccgtggtttccgtt
aacccgcaggttaacccggatatcgtggcaatgatcggtgcttccgctgcgctttcactg
tctggtattccgttcaatggcccgattggcgctgcgcgtgttggttatatcaatgaccag
tacgttctgaacccgactcaggaagagctgaaagcaagtaagctggatctggtggttgcc
ggtactgaagccgcggttctgatggtggaatccgaagcggaactgctgagcgaagatcag
atgctgggcgcggtggtgtttggccatgaccagcagcagattgttatccagaacatcaac
gacctggtgaaagaagctggcaaaccgcgttgggactggcagccggaagcggtaaacgaa
gcgctgaacgcgcgcgttgctgcgctggcagaatcacgtttgagcgatgcgtaccgcatc
actgacaaacaagaacgttatgctcaggttgacgtgattaaatccgaaaccatcgcaacg
ctggtggcagaagatgaaaccctggacgccaacgaactgggcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgtgtactggcaggtgaaccgcgtattgatggccgcgaa
aaagatatgatccgtggtctggacgttcgtaccggtgtactgccgcgtactcacggttct
gcgctgtttacccgtggcgaaacccaggcgctggttactgcaacgctggggaccgctcgt
gacgcgcagatcatcgacgaactgatgggcgagcgcactgactctttcctgttccattac
aacttccctccgtactccgtaggggaaaccgggatggttggttcgccgaaacgtcgtgag
attggccacggccgtctggcaaaacgcggtgtgctggcagtgatgccggatgcagataaa
ttcccgtacaccgtacgtgtggtgtctgaaatcaccgaatcgaacggttcttcttctatg
gcttccgtttgtggcgcatctctggcgctgatggacgctggcgtaccggtgaaagcggcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactttgttgttctgtctgac
atcctgggcgacgaagaccacctgggcgatatggacttcaaagtagcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgctgaatcaggcgaaaggtgctcgtctgcatattctgggcgttatggagcaggcg
attaacgcgccgcgtggtgatatctctgaatttgcgccgcgtatccataccatcaaaatt
aatccagataagatcaaagacgtgatcggtaaaggcggttccgttattcgtgcgctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgatggtaccgtaaaaatcgcagcaact
gacggcgataaagcgaaacatgccattcgccgtattgaagagatcacggctgagatcgaa
gtgggccgtgtctatagcggtaaagtgacccgcatcgttgactttggcgcgtttgttgcc
atcggcggcggtaaagaaggtctggtacatatttctcagatcgcggacaaacgcgttgag
aaagtgaccgattatctgcagatgggccaggaagtgccggttaaagttctggaagttgac
cgtcagggccgtattcgtctgagcattaaagaagcgactgagcagactcagcctgctgaa
gcgtcggaagcgccgcaagcagagcagggcgagtaa
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