Kosakonia pseudosacchari: IP581_20460
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Entry
IP581_20460 CDS
T06897
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kpse
Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:
kpse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpse03016
]
IP581_20460 (truB)
Enzymes [BR:
kpse01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IP581_20460 (truB)
Transfer RNA biogenesis [BR:
kpse03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IP581_20460 (truB)
Prokaryotic type
IP581_20460 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QOV63584
LinkDB
All DBs
Position
complement(4318422..4319369)
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AA seq
315 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKQQGASSNDVLQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPLTFSAEQLATALDSFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPIERMVTLEQLRERVEQAEQQGIPAAQLLDPL
LMPMDSPASDFPAVNIPSVVAAYFKNGQPVRASDAPKTGLVRVTEGDDATFIGMGEMDDE
GRVAPRRLVVEYPAQ
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcatggcgttctgctgctcgataaacag
cagggcgcttccagcaatgatgtgctgcaaaaagttaagcgtctttataacgccaaccgt
gccggacacaccggagcgcttgatccgctggcgaccggcatgctgccgatttgcctgggg
gaagcgacaaagttctcccaatatctactggattcggacaaacgttatcgggtgattgcc
cgccttgggcagcgtaccgatacgtccgatgcggatgggcaaatcgttgaagagcgtcca
ttgaccttcagtgccgaacaactggcgactgcgctggacagttttcgcggtgatacgcag
caagtcccgtcgatgtactctgccctgaaatatcagggaaagaagctctacgagtatgcg
cgtcagggcattgaggttccgcgtgaagcccgcccgattacggtttacgaactgttattt
atccgccatgaaggcaatgaacttgagctggaaattcactgctcgaaagggacttacatc
cgcaccatcattgatgatttgggtgagaaacttggctgcggcgcacatgttatttatctg
cgtcgcctggcggtgagcaagtaccctatcgaacgtatggtaacgcttgagcaattgcgt
gaacgggttgagcaggccgaacagcagggtatcccggcggcacaattgctggatccgtta
ttgatgccaatggatagcccggcgtcagatttcccggcggttaatattccgtcagtcgtc
gcggcatacttcaaaaatggtcagccggtccgggcatccgatgcgccaaaaacggggctg
gtgcgtgtcacagaaggtgatgatgcgacgttcattggtatgggcgaaatggacgacgaa
ggccgtgttgcgccgcgtcgtctggtggtcgagtatcctgcacaatga
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