| Entry |
|
|---|
| Name |
(GenBank) conjugative relaxase
|
|---|
| Organism |
kpse Kosakonia pseudosacchari
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
pBDA62-3:complement(66784..72522)
|
|---|
| AA seq |
1912 aa
MMSPAPIVSAGEAAGYYSNKDNYYFLGQLESEWLGEGASQLGLEGKVRSDQLTAVLEGRL
PDGSRLGKEINGKHTHRPGHDLTFSAPKSVSILALIGGDKALLEAHQRAVRVAAGYVEKL
ISARETVDGKTSIVHTGKMVAALYTHDTTRNLDPGLHTHMLVANMTELNGKWKALATDTI
HNAGFIETVMKMQVTLGKLYRKALREGVESLGHEVEEVGPHGMWEIKAVPKEVREEYSSR
GREIRGAVGAEATLKSLDIAAKNTRKAKVDPSRLRLMERWQTQMKEQGWDMKAYQESVVP
RTVPGDRPAPVPTDPQKTPFGGDVPAAPEQAKEKAREEAGPQTRSGHEENTISSVTTPPR
TDVIPRRDGPEAGEGEQRTEPEQRPGKAAEDKTADRDGKQPAEREQPPEQPERADALEGP
VPGEPPVITPVAGRDGQVQPETAAQIPPPGKPGVEKYTGPEKRADSTPMAGQPVTPPPVV
QTTQDVPPEVTDAVRMAVSQLSDSKTRFTWGELLLSTAEFSDKIPPISELKTALDEALRE
GVIVPLDAEKGVFTSRIHLLDELSIQALSREHLSETRVVSFQRPAQYAPAALEAVERDAL
VLMNAPKGVAGIRELTEQLAGISAAHGREVQVLASSAERAVSLAKSDRLREHITGRQQVL
SGDFQLRPQSTLIVEGAERLSLKETLVLLGEARDKSAQLVFLDSAGRQANGNAMSVLESA
GVVRSRRTEPAPGMEAEVVSIRDKRERYSALADRFAELSAGTEPVTAIVVGQREQKHLTG
LIRDALQNAGQLERDGVTVEARTPVWLDSKTRRMSGSYRAGQVLEDRTERETRHYVIDRV
HEDTRVLSLIDGDGVLVRMKIADLTADWRLYQREQLHIAAGDRLIALAADRGTGLKSKDR
LTVTQAGQEGITVERDGKVLTLPADSPLYLTHGYVAGPGNRDNDSGVVLAALNSRDITAQ
TMNSLAQSGHRAEIFTAEPEDKAEARLQRMRTENSPVQLVRKLSGRDQLDSALTTLHDSV
KTDVTVAVERAIADQQSVTFDVLHLAERAAEFYPDIAGIDREISQMVKKGDLIRVPGQAT
PLLVARATWEMEKAIIRVITEGKNTREPLMDSVDPTLLAGLTSGQKESALLVLGSRDQFT
GIQGYAGVGKTTQVSAVKAAIDTLPASDRPVLYGLAPTHQAVKELRDVGLEAQTLKSWLV
EHEQMVAAGEKPDYRNRVFLIDESSMLGNQDTAAAYLAIQAGGGRGVSMGDTDQFEAIES
GAPFRLAQERSPMDVAIMKQIVRQKEVNLRDAVHDIIDNRIDAALQRLEKQPADNVERLD
PSWKAPASGLVESADPVAAIVDDWISRTPAARARTLVIAQLNEDRESINNGIYAALEARG
ELGREKISVPVLEKIRHTRHEFNKLRAWQPGMVVKRGDAYQDVVAVDTNGSLISVKDEGG
RLAWYSPRELLTGDVELFNRRERELSAGTVVRFTATDRNRGQNANQKYTVEQVRPDGEVV
LKGHDGQKTINPADVRAEQHIDYAWAITGYGSQGAGEDAVISLEGTKGGRAYMATRRAFY
ISVSRAKKHVQVYTDGLEKWVAAIKRQEFDFKTAHDALTPETERRQAKVIWAMGQPVGKT
AIGRAWAKHEALGGHSLTARVIPSTKRFPAPALALPLYDNNGKSAGLALVSLVHGDNGRL
ARGDMRMVATQGATGAVVQRSHSGNTHVVSTVDAALRAVREHPEDGVVWQTGAERPSPWM
IKLSRGTESAEEQKRALSVLVESEIRVPDLKADTTSEEPEKRAVQQVVRETQDIRDTEAL
MAKRVPDADLQGEKPGTLSGVKPDGNILGEIIDERLQRQQERDNVVSRIPAPSDQQMARE
AAEHAVSARVANEIAERRQQQEVRIPGDTVEKGRTVEHQEPAHTRTIQQKER |
|---|
| NT seq |
5739 nt +upstreamnt +downstreamnt
atgatgtcacccgcaccgattgtgtccgccggcgaggcggcgggctattacagcaacaag
gataactactattttctcggccagctggaaagcgagtggctgggtgagggcgcgagccag
ctgggtctggaaggtaaagtccgcagcgaccagctgacggcggtgcttgagggccgtctg
ccggacggttcccggctgggaaaggaaatcaacggcaaacacacccaccggccgggacat
gacctgaccttttccgcacccaaaagtgtgtccatccttgccctgattggcggagataaa
gccctgctggaagcccatcagcgcgccgtccgggtcgcagccggttacgtggagaaactc
atttctgcccgtgaaacggtcgacggcaaaacctccatcgtccacaccggcaaaatggtc
gccgcgctctacacacacgacacgacacgtaacctcgatccgggtttgcatacgcatatg
ctggtcgccaacatgacggagctgaacgggaaatggaaagcactggccactgacaccatc
cataatgctggctttatcgagacggtcatgaagatgcaggtgacgctgggcaaactctac
cgcaaggcactgcgtgagggtgttgagtcccttggccacgaagtggaggaagtggggccg
cacggtatgtgggaaatcaaagccgtgccgaaagaggttcgtgaggagtattcctcacgc
ggccgggaaattcgcggggcggtcggggccgaagccaccctgaaaagcctggatattgca
gccaaaaatacccgtaaagcgaaagtcgatccttcccggctgcgcctgatggagcgctgg
cagacccagatgaaagagcagggatgggacatgaaagcctatcaggagagcgtggtgccc
cggaccgtccccggtgaccgtcctgcccctgtaccgaccgacccgcaaaaaacaccgttc
gggggcgacgtgccggcagcgccagaacaggcgaaagagaaagcgcgggaggaggctggc
ccgcagacccgctccgggcatgaagaaaatacgatctcttctgtcacaacaccaccccgg
acggacgtgataccgcgccgggacgggccggaagccggcgaaggggaacagcgcactgag
ccggaacaacgccccggaaaagctgcagaagataaaacggcagaccgggacgggaaacaa
ccggctgagagggagcagcccccggagcagcctgagcgtgctgatgcccttgaggggcct
gttcctggtgaaccaccggtaataacgcctgttgccggacgcgacgggcaggttcagccc
gaaacagcagcgcaaatccccccgccgggcaagcccggagtggagaagtataccggaccg
gaaaagcgggctgacagcacgccaatggcagggcagcccgttacgcctcctccggttgtg
caaaccacacaggatgtgccgcctgaggtgacggatgcggtccgtatggctgtttcccag
ctgagtgacagtaaaacccgtttcacctggggcgaactgctgctgagtacagcggaattc
agcgacaaaatccccccaatttctgaactgaaaaccgcgctggacgaggcgctgcgggaa
ggggttatcgtgccgctggatgcggaaaaaggggtcttcacgtcgcgtatccatctgctg
gatgaactctccatacaggcgctgagccgggaacacctgagtgaaacccgcgtcgtcagt
tttcagcgtcccgcacagtacgcgccggcggcgctggaggcggtcgagagggatgcgctt
gtcctgatgaatgccccgaagggggtggcgggaatacgggaactgacggaacagcttgcc
ggtatttctgcagcgcatggccgggaggtgcaggtgctggccagctctgccgaacgtgcc
gtgtccctcgcaaaatcggaccgcctgcgggagcacatcacggggcgacagcaggtgctg
agcggggattttcagctgcgcccgcagagcaccctgattgttgagggggcagaacggctg
agccttaaggaaacgctggttctgctcggtgaagcacgggacaaaagcgcgcagctggtc
tttctcgacagcgccgggcggcaggcgaacgggaatgccatgtccgtgctggagtcggcc
ggggtggtgcgcagccgccggacggaaccggcaccggggatggaggcggaagtggtcagc
atccgggacaagcgcgagcgctacagtgccctggctgaccgctttgcggagctgagcgcc
ggcacagagccggtgaccgccattgtggtcggacagcgtgagcagaagcacctgaccggg
cttatccgggatgcgctgcagaatgccggtcagcttgaacgtgacggtgtcacggtggag
gcgcgcacgccggtctggctggacagtaaaacccgccggatgagcggctcctaccgcgcc
gggcaggtactggaagaccggacggagcgcgaaacccgccattacgtgattgaccgcgtg
catgaggacacgcgggttctgtcactgattgacggggacggggtgctggtccgcatgaaa
atcgccgatctgaccgcagactggcgactctaccagcgcgagcagttgcatatcgccgcc
ggtgacaggctgattgcgctggcagcagatcgcggtaccggtctgaaatcaaaagaccgg
ctgaccgtcacgcaggccggtcaggaagggataacggtggagcgggacggcaaagtcctg
accctgccggcagacagcccgctctatctcacccacggctatgttgcgggacccggcaac
cgcgacaatgacagcggtgtggtgctggccgcgctgaattcacgggatatcaccgcgcag
accatgaattccctggcgcagtcaggacaccgcgccgaaatcttcacggcagagccggaa
gacaaggcagaagcccgcctgcagcgtatgcggacagaaaactcccccgtgcagctggtc
cgtaaactcagtggccgggatcagctggacagtgccctgaccaccctgcatgacagtgtg
aaaacggacgtcacggtggccgtcgagcgcgccatcgccgaccagcagtcggtgacgttc
gacgtgttacatctggccgagcgggccgctgagttttatcccgatatcgccgggattgac
cgggaaatcagccagatggtcaaaaagggggacctcattcgtgtgccgggtcaggcgacg
cccttactggttgcccgtgcgacctgggaaatggaaaaagccatcatccgtgtcatcacg
gaggggaaaaatacccgggagccactgatggacagcgtcgacccgaccctccttgccggg
ctgacgtccgggcagaaagaatctgcgctgctggtactgggttcccgcgatcagtttacg
gggattcagggttatgcgggggtggggaaaaccactcaggtcagtgcggtaaaagcggcc
atcgataccctgcctgcgtctgacaggccggttctttacggactggctcccacccaccag
gccgtgaaggagctgagggacgtcgggctggaggcgcagaccctgaaatcctggctggtt
gagcacgagcagatggtcgccgccggcgagaaacccgactaccgcaacagggtgtttctt
atcgatgaatcctcgatgctcggtaaccaggatacggcggccgcgtatctggccatccag
gccggcggcgggcggggcgtttcaatgggtgacaccgaccagtttgaagcgattgaatcc
ggtgcgccgttccggctggcacaggaacgcagcccgatggatgtggccatcatgaaacag
attgtccgccagaaggaggtcaatctgcgggacgcggtacacgacatcattgataaccgc
atcgatgccgcgctgcagcgtctggagaaacagccggcggacaatgtggaacgcctggac
ccgtcctggaaagcgcctgcatcaggcctggtggaatctgccgacccggtcgccgccatt
gtggacgactggataagccgcacgccggcggcgcgcgcgcgaacgctggtcatcgcgcag
ctgaacgaggacagggagagcatcaataacggcatttatgccgcgcttgaggcacgcggt
gagctggggcgggagaaaatcagcgtgccggtgctggagaaaatccggcacacccgccat
gaattcaacaaactcagggcgtggcagcccggtatggtggtgaagcggggcgatgcttat
caggatgtggtggccgtggataccaacggctcgcttatctccgtcaaggacgagggcggc
agactcgcctggtactccccgcgcgaactgctgaccggggatgtggagctctttaaccgc
cgcgagcgggaactgagcgccggcaccgtggtgcggttcaccgccactgaccgcaaccgg
gggcagaacgccaaccagaaatacacggttgagcaggtccggccggacggggaggtggtg
ctgaaaggccacgacggacagaaaaccattaacccggcagacgtgcgcgccgaacagcac
attgattatgcctgggcaatcaccggctacggttcacagggggccggtgaggacgccgtt
atttccctggaggggacaaaaggcgggcgggcgtacatggccacccggcgcgcgttctat
atttctgtttcccgcgccaaaaaacacgttcaggtgtacacggacggtctggaaaaatgg
gtggcggccatcaaaaggcaggagtttgatttcaaaacggcgcatgatgccctgacgccg
gagacagagcgccggcaggcgaaggtcatctgggcgatggggcagccggtcgggaaaacc
gcaatcgggcgggcatgggcaaaacacgaagcactgggcggtcacagcctgaccgcccgc
gttattccgtccactaaacgctttccggcgccggcgctcgcactgccgttgtacgacaac
aacgggaaaagtgccggtctggcgctggtttcgctggtacacggcgacaacggacggctg
gcgcggggggacatgcgcatggtggctacgcagggtgccaccggtgcggtggtgcagcga
agccacagcggtaacacccatgtggtcagtacggtcgacgcggcgctgcgggcggtccgg
gagcacccggaggacggggtggtctggcagaccggcgcggagagaccctctccctggatg
attaagctgagccggggcaccgagagtgcagaggaacagaaaagggcactgtcggtactg
gtcgaatcagaaatcagggtgccggatttgaaagcggacaccaccagtgaagaaccggaa
aaacgggctgttcaacaggtcgtaagggaaactcaggatatcagggatactgaagcgctg
atggcgaaacgtgttcctgatgcagaccttcagggagagaaacccggcaccctgtctggc
gtcaaaccagacgggaatattctgggtgaaatcattgacgagagactgcagcggcaacag
gaaagagataatgttgtcagcaggataccagcgccgtcagaccagcagatggccagagaa
gcagccgaacacgcggtatcagcgcgtgtggcgaatgaaattgctgagcggcgacagcag
caggaggtacgcattccgggcgacacagtggagaaaggacgcactgttgagcatcaggaa
cctgcgcatacccgcaccatacaacaaaaagaacgttaa |
|---|
