Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_1026
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Entry
VK055_1026 CDS
T03418
Symbol
hrpA
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpt03019
]
VK055_1026 (hrpA)
Enzymes [BR:
kpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
VK055_1026 (hrpA)
Messenger RNA biogenesis [BR:
kpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
VK055_1026 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
AAA_19
AAA_22
nSTAND3
T2SSE
NACHT
ResIII
PhoH
AAA_16
SLFN-g3_helicase
AAA_23
NTPase_1
TsaE
Motif
Other DBs
NCBI-ProteinID:
AIK79649
LinkDB
All DBs
Position
complement(1019272..1023174)
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRDNLKLRAEIEELE
HKSRRRDILVDDETLFEFYDQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRATPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctgcacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggttagc
cagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggtaaaaccacccagttgcccaaaatctgcatggagctggggcgcggg
ctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgccaat
cgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgcttc
agcgaccatgtcagcgaaaacaccatggttaagctaatgaccgacggtatcctgctggcg
gagatccagcaggatcgtctgttgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagtctgaatattgactttctgctcggctatctgaaagagctcctgccgcgccgc
ccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatctttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggtgag
cgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
ggacggcgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggcatt
aagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatatccaggacggcgtacgcctgctggaagagctgggcgccatcaccaccgatgcgcag
gcaacggcttataagctaaccccgctgggccgccagctcagccagctaccggtggatccg
cgtctggcgcgcatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacatcgccgcttccacgataaagagtccgatttcctcgccttcgtcaat
ctgtggaactacctcggcgagcagcagaaggcgctgtcgtcgaatcagttccgccgccag
tgccgggtcgattttcttaactatctgcgtgtgcgcgagtggcaggacatctacacccag
ctgcgccaggtggtgaaagagcttggcctgccgatcaacagtgagccggcggaatatcgc
gagatccatactgcgttgctgaccggtctgctgtcgcacatcggcatgaaggatgccgat
aaacaggagtataccggcgcccgtaatgcgcggttctctattttcccgggttccggcctg
tttaaaaagccgccaaagtggacgatggtggccgagctggtggagaccagccggctgtgg
gggcgtattgccgcccgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcatacagtgagccgcactgggagcgggcgcagggcgcggtgatggcgacggaa
aaggtcaccgtttacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccagatc
gacccggcgctgtgccgcgaactgtttatccgccatgcgctggtggagggcgactggcag
acgcgtcacgccttcttccgcgataacctgaagctgcgcgcggaaatcgaagagctggag
cataagtcgcgccgccgcgacatcctggtggatgacgagacgctgttcgagttctacgac
cagcgcatcagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgggcc
agccgtgaaaccccggatctgctcaattttgaaaagagcatgctgattaaagagggggcg
gagcaggtcagcaagctggactacccgaacttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaaccgggcgctgacgccgacggcgtgacggtgcatattccgctg
ccgctgctcaaccaggtggaggaggccggatttgaatggcagatccctggtctgcgtcgc
gagctcattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttcttggccgggcgacgccgcttgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaagtg
caggagacgctgtcggcggtcgctgatgacggtattgagcagagcgggctgcatatctgg
agctttggcaccctggcggaaagttacgaacagaagcgcggtaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtggccatcaagctgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggcgttgataagctt
atcgacgaggcgggcggtccggtgtggacggaagagggctttagtcagctgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctg
gagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcagctg
ggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacccca
tag
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integrated database retrieval system
