Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_3301
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Entry
VK055_3301 CDS
T03418
Symbol
polA
Name
(GenBank) DNA polymerase I, 3' --5' polymerase, 5' --3' and 3' --5' exonuclease
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Pathway
kpt03030
DNA replication
kpt03410
Base excision repair
kpt03420
Nucleotide excision repair
kpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VK055_3301 (polA)
03410 Base excision repair
VK055_3301 (polA)
03420 Nucleotide excision repair
VK055_3301 (polA)
03440 Homologous recombination
VK055_3301 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpt03032
]
VK055_3301 (polA)
03400 DNA repair and recombination proteins [BR:
kpt03400
]
VK055_3301 (polA)
Enzymes [BR:
kpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VK055_3301 (polA)
DNA replication proteins [BR:
kpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
VK055_3301 (polA)
DNA repair and recombination proteins [BR:
kpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
VK055_3301 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VK055_3301 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
HHH_5
Prok-E2_E
XPG_N
Motif
Other DBs
NCBI-ProteinID:
AIK81862
LinkDB
All DBs
Position
complement(3386856..3389648)
Genome browser
AA seq
930 aa
AA seq
DB search
MVQIPENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLILQYQPTHAVV
VFDAKGKTFRDELFEHYKSHRPPMPDDLRAQIEPLHKMVKAMGLPLMAVPGVEADDVIGT
LAREAERAGRPVLISTGDKDMAQLVTPGITLINTMTNTILGPDEVVTKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYAEPEKIAELSFRGAKTMAAKLEQNK
DVAYLSYQLATIKTDVELELTCEELEVQPPAADDLLALFRQYEFKRWTTDVEAGKWLQAK
GGKPAAKPAVPAAAAEAEEEVEAATALSAEHYVTILDEATLLTWIDKLKQAPLFAFDTET
DSLDNISANMVGLSFAVEPGVAAYVPVAHDYLDAPDQIPRERVLTLLKPLLEDEKVLKVG
QNLKYDRGILANYDIELRGIAFDTMLESYILDSVAGRHDMDSLSDRWLKHKTITFEEIAG
KGKNQLTFNQIALEEAGRYAAEDADVTLQLHLKMWPKLQQHEGPLNIFQHIEMPLVPVLS
RVERNGVKIDPAVLHAHSQEIAQRLVELEQRAHEIAGEAFNLSSTKQLQTILFEKQGIKP
LKKTPGGAPSTSEEVLEELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPKTGRVHTS
YHQAVTATGRLSSTDPNLQNIPVRNEEGRRIRQAFIAPEDYVIVSADYSQIELRIMAHLS
RDKGLLTAFAEGKDIHRATAAEVFGLPLDSVSSEQRRSAKAINFGLIYGMSAFGLARQLN
IPRKEAQKYMDLYFERYPGVLEYMERTRAQAKEQGYVETLDGRRLYLPDIKSSNGARRAG
AERAAINAPMQGTAADIIKRAMIAVDEWLRSEKPRVRMIMQVHDELVFEVHKDELDAVSK
KIHELMENSTTLAVPLLVEVGSGENWDQAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggttcagatcccagaaaaccctctcatcctcgttgacggctcctcctatctttatcgg
gcgtatcatgcgtttccgccgctgactaacagcgcaggggagcccaccggggctatgtac
ggcgtactgaatatgctgcgcagtttgatactgcagtatcaaccgactcatgccgtcgtg
gtctttgatgcgaaagggaaaaccttccgtgatgaattgttcgagcattacaaatctcac
cgcccgccgatgccggacgatctgcgcgcgcagattgagccgttgcataagatggtgaaa
gcgatggggctgccgctgatggctgtcccgggcgtcgaagctgacgatgtgattggcacc
ctggcgcgggaagcggaaagggcaggtcgcccagtcctgatcagcaccggcgataaagac
atggcccagctggtgacgccgggcatcaccctgatcaataccatgaccaacactatcctc
ggaccggatgaggtggttactaagtacggcgtcccgccggagctgattattgatttcctg
gcgctgatgggcgactcctcggataacattcccggcgtgccgggcgtgggcgaaaagacc
gcccaggcgctgctgcaaggcctcggcggccttgatacgctgtatgcggaaccggagaag
atcgctgaactgagcttccgcggcgcgaaaacgatggcggcgaagctcgagcagaacaag
gacgtggcttatctctcttatcagctggcgaccatcaaaaccgacgtcgagctggagctc
acctgcgaagagctggaggtgcagccgccggcggcagacgatctgctggcgctgttcaga
cagtatgaatttaagcgctggaccactgacgttgaggccggaaaatggctgcaggctaag
gggggcaaaccggctgcgaaacctgcagtgcctgcagcagcggcagaagcggaagaagag
gttgaagccgctactgcactttcagcagagcattatgtcactatccttgatgaggctacg
ctgctcacctggatcgataagctgaagcaggcgccgctctttgcctttgatacggaaacc
gacagcctggataacatctccgccaacatggttggtctttcattcgctgttgagccgggc
gtggccgcctatgtcccggtagcgcatgattaccttgatgcgccggatcagatcccgcgc
gagcgcgtgctgacgctgcttaaaccgctgctggaggatgagaaggtgctcaaggtcggg
caaaatctcaaatacgatcgcggcattttggctaattacgacattgagctgcgcgggatt
gcgttcgataccatgctcgagtcttacattctcgacagcgtggctggccgccacgatatg
gacagtctttccgaccgctggctgaaacataaaaccattaccttcgaagagatcgctggc
aagggtaagaatcagctcacctttaaccagattgcgctggaagaggctggtcgctacgcg
gcggaagatgctgacgttacgctccagctgcatctgaagatgtggccgaagctacagcag
catgaaggcccgctgaatatcttccagcacattgaaatgccgctggtgccggtgctgtct
cgcgttgagcgcaacggcgttaaaatcgaccccgccgtgctgcatgcgcactcgcaggaa
attgcccagcgcttggttgagctggagcagcgggcacatgagatcgccggggaagcgttt
aatctctcctccaccaaacagctgcaaacgatcctgtttgaaaaacagggtatcaagccg
ctgaagaagacgccgggcggtgcgccgtccacctctgaagaggtgctggaagagctggcg
ctcgattatccgttgccgaaagtgattctggagtatcgtgggctggcgaagctgaagtct
acctataccgataagctgccgctgatgattaaccccaaaacgggccgcgtgcatacctcc
tatcatcaggcggtcaccgccaccggccgtttgtcgtctaccgatccaaacctgcaaaac
attccggtgcgtaacgaagaagggcgccgtattcgccaggcgtttatcgcgccggaagat
tacgtcattgtctcggcggactactcgcaaatcgagctgcgcattatggcgcacctgtcg
cgggataaaggcctgctgaccgccttcgcggaagggaaggatattcaccgggcgacggcg
gctgaagtatttggcttaccgctggacagcgtcagcagcgaacagcggcgtagtgcgaaa
gccatcaacttcggtctgatctacggcatgagcgcctttggcctggcccgccagctgaac
atcccgcgtaaagaagcgcagaagtacatggatctttatttcgagcgttatccgggcgtc
ctggagtatatggagcgcacccgcgcacaggcgaaggagcaagggtatgttgaaacgctg
gatggccgtcgactctatttgccggatatcaagtccagcaatggcgctcgtcgtgccggc
gcggagcgtgcggcgattaacgccccgatgcaggggacggctgcggatattatcaagagg
gcgatgattgccgttgatgaatggctgcggagcgagaaacctcgcgtgcggatgatcatg
caggttcacgatgaactggtctttgaagtgcataaggatgagctcgatgccgtatcgaaa
aagatccacgaactgatggagaacagcactacgctggcggtaccgttgctggtggaagtg
ggcagcggcgaaaactgggatcaagcgcactaa
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