Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_3995
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Entry
VK055_3995 CDS
T03418
Name
(GenBank) sigma70 factor RNA polymerase, sigma 70 (sigma D) factor
KO
K03086
RNA polymerase primary sigma factor
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Pathway
kpt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VK055_3995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpt03021
]
VK055_3995
Transcription machinery [BR:
kpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VK055_3995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
AIK82542
UniProt:
A0A2W0WX81
LinkDB
All DBs
Position
complement(4096282..4098123)
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AA seq
613 aa
AA seq
DB search
MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATH
VGSELSQEEMDDDEDEDEDEDADDNSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR
SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRSMMDRVRTQERIIMKLCVEQCKMPKK
NFITLFTGNETSETWFNAAVAMNKPWSEKLLEVKEDVQRGLQKLQQIEEETGLTIEQVKD
INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP
EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL
RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattccgatcag
atcgaagacatcatccaaatgatcaacgacatgggtattcaggtgatggaagaagcaccg
gatgccgatgatctgatgcttgccgaaaacaccgcggatgaagatgctgccgaagccgcc
gcgcaggtgctctccagcgtggaatccgaaatcgggcgcacgaccgacccggtgcgtatg
tacatgcgtgaaatgggtaccgtagagctgctgacccgtgaaggcgaaattgacatcgcc
aaacgcatcgaagacggcatcaatcaggtgcagtgctccgttgccgaatatccggaagcg
atcacctacctgcttgagcagtacgaccgcgttgaagcggaagaagcccgtctgtccgat
ctgatcaccggtttcgtcgatccgaacgccgaagaagatatggcgccaaccgccacccac
gttggctccgagctgtctcaggaagagatggatgacgacgaagacgaagacgaagatgaa
gacgccgacgacaacagcgatgacgacaacagcatcgacccagagctggcccgtgagaaa
ttcgccgagctgcgtacccagtacgagctgacgcgcgacaccatcaaagccaaaggtcgt
agccatgccgccgcccaggaagagatcctgaagctgtctgaagtcttcaagcagttccgc
ctggtgccgaagcagttcgattacctggtcaacagcatgcgcagcatgatggatcgcgtt
cgtactcaggaacgtatcatcatgaagctgtgcgttgagcagtgcaagatgccgaagaaa
aacttcatcaccctgttcaccggcaacgaaaccagcgaaacctggttcaacgccgcggtg
gcaatgaacaagccgtggtctgagaagctgctggaagtgaaagaagatgtgcagcgcggc
ctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggttaaagat
atcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatggtt
gaagcgaacctgcgtctggttatctctatcgccaagaaatacaccaaccgcggtctgcag
ttcctcgacctgattcaggaaggcaacatcggtctgatgaaagcggtcgataagttcgaa
taccgtcgcggctacaagttctcgacctacgccacctggtggatccgtcaggccatcacc
cgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagacaatt
aacaagctcaaccgtatctcccgtcagatgctgcaggagatgggccgtgaaccgaccccg
gaagagctggctgagcgtatgctgatgccggaagacaaaatccgtaaagtgctgaagatc
gccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctgggg
gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgagagcctg
cgcgcggcaacgcatgacgtgctggccggcctcaccgctcgtgaagcgaaagtgctgcgt
atgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacagttc
gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactacgccac
ccgagccgttctgaagtgctgcgtagcttcctcgacgattaa
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