Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_4297
Help
Entry
VK055_4297 CDS
T03418
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Pathway
kpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VK055_4297 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpt03400
]
VK055_4297 (recD)
Enzymes [BR:
kpt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
VK055_4297 (recD)
DNA repair and recombination proteins [BR:
kpt03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VK055_4297 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_28
PhoH
MukB
AAA_16
T2SSE
CbiA
UvrD_C
SRP54
TrwB_AAD_bind
DEAD
AAA
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIK82842
LinkDB
All DBs
Position
4405100..4406944
Genome browser
AA seq
614 aa
AA seq
DB search
MTFEQLLLAAVEQRLLRPLDVQFALMVAQNDPPAVKLAAALLSRDAGEGHVCLPLSRLSG
DEALSGKAGEIRDRLLAEAGAPEDWPALLLASSAVSCGDAPAPMILCGDRLYLNRMWRNE
LTVARFFNEANRVLEMDEARLASTLNALFPATGETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALIQIEDSPRCRIRLAAPTGKAAARLTESLGAALRKLPLTDAQKALIPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFLG
DRDQLASVEAGAVLGDICAWASSGYTAARAQELTRLTGSPVPAGEGAIAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNAGARAEVKATLRQPFDDIALHPLSTTEEYEAMLGAAQQGYD
RYLQLRRERAEPQAMLAAFSEFQLLCALREGPYGVSGVNERLEQRLNRQRAIALPRHSRW
YDGRPIMISRNDSALGLFNGDIGIALERNGELRVWFLMPDGAIKSVQPSRLPEHDTAWAM
TVHKSQGSEFEHAALILPARSVPLVTRELVYTAITRAKRRLSLYADEQVLSQAIVTRTER
RSGLAEIFAGRETP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaacaactactgctggcggcggtggagcagcgtctgctgcggccgctggac
gtccagtttgccctgatggtggcgcaaaacgacccgccggcggtcaagctggcggcggcc
ttgctgagccgggatgccggcgaggggcacgtctgtctgccgctctcgcggttgagcggc
gacgaggcgctgagcggtaaagcgggggagatccgcgatcggctgctggctgaagccggc
gcgccggaggactggcccgcactgctgctcgcttcgtcggcggtgagctgcggcgatgct
ccggcgccgatgattttgtgcggcgaccggctctatctgaatcggatgtggcgcaacgag
ctgaccgtcgcccgcttcttcaatgaagccaaccgggtgctggagatggatgaggcccgg
ctggcgtcaaccctgaatgccctgttccctgccaccggcgaaaccgactggcaaaaagtg
gccgcggcggtggcgctgacccgccgcatctcagtgatctccggcggtcccgggaccggg
aagaccaccaccgtggcgaagcttctggcggcgctgatccagattgaagacagcccgcgc
tgtcgtattcgcctggcggcgccaaccgggaaagcggcggcgcgtctgaccgaatcgctg
ggcgcggcgctgagaaaattgccgctgaccgacgcgcagaaagcgttgattcccaccgag
gccagcacgctgcatcgtctgctgggagcccagcccggcagccagcggatgcgctatcac
gccggcaacccgctgcatctggacgtgctggtggtggatgaagcctcgatgatcgacctg
ccgatgatgtcgcggcttatcgacgcgctgccggcccacgggcgggtgattttcctcggc
gatcgcgaccagctggcctccgtagaagcgggggcggtgctgggggatatctgcgcctgg
gcgagttcgggctataccgccgcgcgggcgcaggagctgacccggctgaccggttcgccg
gtgccggcgggcgagggggctatcgcgggcgcgctgagagacagtttgtgcctgctgcaa
aagagctatcgcttcggtagtcactccggcatcgggagcctggcgcgggcggtgaacgct
ggcgcgcgcgcggaggtgaaggccacgctgcgccagccgtttgacgatatcgcgcttcat
cccctcagcacaaccgaagagtacgaagccatgctcggcgcggctcagcagggctatgat
cgctacctgcagctgcgccgcgagcgggccgaaccgcaggccatgctggccgctttcagt
gaattccagctgctgtgcgcgctgcgcgaggggccgtacggcgtgagcggcgtcaatgag
cggctggagcagcggctcaaccgccagcgggcgatcgccctaccgcgccactctcgctgg
tatgatggccgaccgatcatgatatcgcgcaacgacagcgcgctggggctgtttaacggc
gatatcggcatcgccctggagcgcaacggcgagctgcgggtgtggttcctgatgcccgac
ggcgccatcaagtcggtgcagccgagccgtctgccggagcatgataccgcctgggcgatg
accgtgcataaatcgcagggctcggagttcgaacacgcggcgctgatcctgccggcgcgc
agcgtcccgctggtgacccgcgaactggtctacacggcgatcacccgcgcgaaacggcgg
ttgtcgctctatgccgacgagcaggtgctctcccaggccattgtgacgcgcaccgaacgg
cgcagcggcctggcggagattttcgccgggcgcgaaaccccctga
DBGET
integrated database retrieval system
