Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_4409
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Entry
VK055_4409 CDS
T03418
Symbol
ygbO
Name
(GenBank) tRNA pseudouridine 13 synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpt03016
]
VK055_4409 (ygbO)
Enzymes [BR:
kpt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
VK055_4409 (ygbO)
Transfer RNA biogenesis [BR:
kpt03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
VK055_4409 (ygbO)
Prokaryotic type
VK055_4409 (ygbO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIK82952
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All DBs
Position
4516602..4517651
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AA seq
349 aa
AA seq
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MIAFDQLTWLHGKPQSSGLLKANPEDFLVVEDLGFAPDGEGEHVLVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSKFQLEGCQVLEYARHKRK
LRLGALKGNQFTVILREISDRQDVETRLQAIAERGVPNYFGAQRFGIGGSNLQGALRWAE
SGAPVRDRNKRSFWLSAARSALFNQQVSIRLKKTEFNQVVDGDALQLAGRGSWFVVTPEE
LEVSQARVHNRELMITATQPGNGDWGSQRDALAFEQAAIAEETALQALLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTTGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcctttgaccaactgacctggctgcacggcaaaccgcagagcagtgggctgctg
aaagccaatccggaagattttctggtggtggaagatctgggctttgccccggacggcgaa
ggcgaacacgtgctggtgcggatcctgaaaaacggctgcaatacgcgctttgtcgccgac
gcgctggcaaaattccttaagatccacgcccgtgaagtgagcttcgccgggcaaaaggat
aagcacgcggtcaccgagcagtggctgtgcgcccgggtgcccggcaaagagatgccggac
ctgagcaaatttcagctcgagggctgccaggtactggaatatgctcgccataagcgtaag
ctgcgtttaggcgcgctgaaaggcaaccagtttaccgtgatcctgcgcgagattagcgat
cgccaggacgtggagacgcgtctgcaggccatcgctgaacggggagtgccgaactatttc
ggcgcgcagcgctttggcattggcggcagtaacctgcagggcgccctgcgctgggcggag
agcggcgcgccagtgcgcgatcgcaataagcgcagtttttggttgtcggcagcccgcagc
gcgttgtttaatcagcaagtgagtattagattaaaaaaaacggaatttaatcaggtcgtt
gatggcgatgcgctacaattagcggggcgcgggagctggtttgtcgtcacaccggaagaa
ctcgaggtttcgcaggcgcgggtgcataaccgcgaactgatgattacggccacgcagccg
ggcaacggcgactggggaagccagcgcgacgccctggctttcgagcaggccgcgatcgcc
gaggaaaccgcgttgcaggcgctgctggtacgggagaaagtcgaggcggcgcgccgggcg
atgcttctctatccacagcagctcagctggaactggtgggatgacgtaaccgttgaactg
cgtttctggctgccggcgggcagcttcgccaccagcgtggtcagggagcttatcaataca
acgggtgactatgcgaatattgctgagtaa
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