KEGG   Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_0143
Entry
KP1_0143          CDS       T00910                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
kpu  Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Pathway
kpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KP1_0143 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpu03019]
    KP1_0143 (rhlB)
Enzymes [BR:kpu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KP1_0143 (rhlB)
Messenger RNA biogenesis [BR:kpu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     KP1_0143 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 ERCC3_RAD25_C CCDC138_C
Other DBs
NCBI-ProteinID: BAH61052
LinkDB
Position
complement(145565..146830)
AA seq 421 aa
MSKTHLTEQKFSDFALHPAVIEALEKKGFHNCTPIQALALPLTLEGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRQVNQPRALIMAPTRELAVQIHADAEPLALATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPPATQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQTLLEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALMTDLPKPLRLTRARPGNGPRRNGPPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccggcagtc
attgaagcccttgaaaagaaagggtttcataattgcacacccattcaggccctcgccctt
ccgctgacgctggaaggccgcgatgtcgccgggcaggcgcaaaccggtaccggtaaaacg
atggcgttcctgacgtcaacgtttcattatcttctctctcacccggctatcgccgatcgc
caggttaaccaaccgcgcgcgctgattatggcgccgacgcgtgaactggcggtacagatc
cacgccgacgctgagccactggcgctggccaccggtctgaagctgggtctggcttacggc
ggcgacggctacgataaacagctgaaagtgctggaaagcggcgtcgatattctgatcggc
accactggtcgtctgatcgattacgcgaagcagaaccacattaacctcggcgccattcag
gttgtcgtgctggacgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgcatgccgccggccactcagcgcctgaacatgctgttctccgcgacc
ctttcttatcgcgtccgcgaactggcgttcgaacaaatgaataacgccgagtacgttgaa
gtcgagccggaacagaagacaggccaccgtattaaagaagagctcttctacccttccaat
gaagaaaaaatgcgcctgctgcagacgctgctggaagaagagtggcccgatcgcgccatc
gttttcgccaataccaagcaccgttgcgaagatatctggggccatctcgccgccgacggc
catcgcgtaggtctgctgaccggcgacgtggcgcagaaaaaacgtctgcgcattctcgaa
gaatttacccgtggcgacctcgatattctggtcgcgaccgatgttgccgcccgtggctta
catattccggccgtgactcacgtctttaactacgatctgccggacgactgcgaagattac
gttcaccgcatcggccgtaccggtcgcgctggcgccagcggtcactccattagcctcgcc
tgcgaagagtatgcgctgaatctgccggcgatcgaaacctatattggtcactcaattccg
gtcagtaagtacaacccggacgcgctgatgaccgacctgcctaagccgctgcgtctgacc
cgtgcgcgcccaggcaacggcccgcgccgtaacggtccaccgcgcaatcgtcgtcgttca
ggttaa

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