Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_0145
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Entry
KP1_0145 CDS
T00910
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
kpu
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Pathway
kpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KP1_0145 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpu03021
]
KP1_0145 (rho)
03019 Messenger RNA biogenesis [BR:
kpu03019
]
KP1_0145 (rho)
Transcription machinery [BR:
kpu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KP1_0145 (rho)
Messenger RNA biogenesis [BR:
kpu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KP1_0145 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
BAH61054
LinkDB
All DBs
Position
147760..149091
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AA seq
443 aa
AA seq
DB search
MEVPAIPFTTLSSRFTPSLRTHTTMNLTELKNTPVSELITLGENMGLENLARMRKQDIIF
AILKQHSKSGEDIFGDGVLEILQDGFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDT
ISGKIRPPKEGERYFALLKVNEVNYDKPENARNKILFENLTPLHANSRLRMERGNGSTED
LTARVLDLASPIGRGQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEV
TEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNT
VVPASGKVLTGGVDANALHRPKRFFGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFK
GTGNMELHLSRKIAEKRVFPAIDYNRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAM
EFLINKLAMTKTNDDFFDMMKRS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggaagttcctgccataccattcacaacattaagttcgagatttaccccgagtttaaga
acccacaccactatgaatcttaccgaattaaagaatacgccggtttctgagctgattact
ctcggcgaaaatatggggctggaaaacctggctcgtatgcgtaagcaggatattattttt
gccatcctcaagcagcattcgaagagtggcgaagatatctttggcgacggcgtactggag
atactgcaggatggatttggattcctccgctccgcagacagctcctacctcgccggccct
gacgacatctacgtatcccccagccaaatccgccgtttcaacctccgcactggtgacacc
atttccggtaagattcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagtt
aacgaagttaactacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaactta
acgccgctgcacgcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagac
ttaaccgctcgcgtactggatctggcctccccgattggccgcggccagcgtggtctgatc
gtcgcgccgccgaaggccggtaaaaccatgctgctgcagaacatcgcgcagagcatcgca
tacaaccacccggactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtg
accgagatgcagcgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggca
tcccgtcacgtgcaggttgccgagatggttattgagaaagcgaaacgtctggttgaacac
aagaaagacgttatcatcttgctcgactccattacccgtctggcgcgtgcctacaacacc
gtggttccggcttccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgt
ccgaagcgtttctttggtgcggcacgtaacgtcgaggagggcggtagcctgaccatcatc
gccacggcgctgatcgacaccggttccaaaatggacgaagttatctacgaagagtttaaa
ggcaccggtaacatggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccg
gctatcgactacaaccgttccggtacccgtaaagaagagctgcttaccactcaggaagag
ctgcagaaaatgtggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatg
gaattcctcatcaataagctggcaatgaccaagacgaatgatgacttcttcgatatgatg
aagcgctcgtaa
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