Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_3446
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Entry
KP1_3446 CDS
T00910
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpu
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Brite
KEGG Orthology (KO) [BR:
kpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpu03016
]
KP1_3446 (rnd)
Enzymes [BR:
kpu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KP1_3446 (rnd)
Transfer RNA biogenesis [BR:
kpu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KP1_3446 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
BAH64048
LinkDB
All DBs
Position
complement(3265522..3266649)
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AA seq
375 aa
AA seq
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MNYQMITTDNGLRAVCEAASTASAVALDTEFVRTRTYYPQLGLLQLFDGQQVSLIDPLTI
NDWAPMRDLLLNQDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLPAAL
DECRVMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSTEKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAERLKTLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcactaccgacaatggcctgcgcgctgtctgcgaagcggcaagc
acggcctccgccgtcgctctggatacggaatttgtccgcacccgcacctattacccgcag
ctgggcctgctgcagctgttcgacggccagcaggtctctctgatcgatcccttgacgatt
aacgactgggcgccgatgcgcgacctgctgctcaaccaggatgtgactaaatacctgcat
gccggcagcgaagatttagaagtcttccttaatgcatttaacctgatgccgcagccgctg
attgacacccagatcctggcggccttctgcggccgcccaatgtcctggggcttcgcctcg
atggtggaagagtattccggggtagcgctggataaaagcgaatcccgcaccgactggctg
gcgcgcccgctgactgagcgtcagtgtgaatatgccgcggccgacgtctggtatctgctg
ccgatcgccagccagttaatggcggagaccgatcgcgctggctggctgccggcggcgctc
gacgagtgccgcgtgatgcagcagcgtcgtcaggaggtggtcgacccggccgaggcctgg
cgcgatatcggcaacgcctggcagctgcgtacccgccagctgggttgtctgcagctgttg
gcggagtggcgcctgcgcaaagcgcgcgagcgcgacctggcggtaaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctgggcgagctcgacagc
ctcgggttgtccggtagcgaaattcgcttccacggcaaaacgctgattagcctggtcgaa
aaagcgcaggcgctgccggagtcggccctgccggcgccgctgcagaacctgatcgacatg
ccgggctaccgcaaagcctttaaagatattaaagcgctggtgcaggaagtgagcacggag
aagggcgtaagcgcggagctgctggcgtcgcgtcggcagatcaaccagctgctgaactgg
cactggcagctgaaaacgcaagccggtgaacctgagctgatttccggttggcgcggggag
ctgatggccgagcggctgaagacgctgttaaacgactatccgcgctag
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