Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_4158
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Entry
KP1_4158 CDS
T00910
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kpu
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Brite
KEGG Orthology (KO) [BR:
kpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpu03009
]
KP1_4158 (srmB)
Enzymes [BR:
kpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KP1_4158 (srmB)
Ribosome biogenesis [BR:
kpu03009
]
Prokaryotic type
rRNA helicases
KP1_4158 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
CMS1
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BAH64696
LinkDB
All DBs
Position
3988816..3990147
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AA seq
443 aa
AA seq
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MTVTTFSELELDENLLEALQDKGFTRPTAIQAAAIPPALDGRDILGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKHTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEEPVEVSANPSTRERKKIHQWYYRADDIEHKTKLLV
NLLQQPEATRAIVFVRKRERVHELANWLREAGINTCWLEGEMVQAKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVFNFDMPRTADTYLHRIGRTGRAGKKGTAISLVEAHDHLLL
GKIGRYIEEPLKARVIDELRPTTRAPSEKLTGKPSKKVLAKRAQKKKDEKEKPRVKKRHR
DTKNIGKRRKPSAAGTPSASSDE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgacgaaaacctgctggaggccctccag
gataaaggtttcactcgcccgacagccattcaggccgccgctattccgcctgcgctcgat
ggccgtgacattctcggttcagcgccgaccggcaccggtaaaacggcggcgtatctgctg
ccagcgttgcagcacctgctcgatttcccgcgtaagaaatccggcccgccgcgcattctt
atcctgacgccgacccgtgagctggcgatgcaggtggccgaccacgcccgcgagctggcg
aagcatacccatctggacatcgctaccattaccggcggcgtggcgtacatgaaccacgcg
gaagtgttcagcgaaaaccaggacatcgtagtcgccaccaccggtcgcctgctgcaatat
attaaagaagagaatttcgactgccgcgccgtcgagaccctaatcctcgatgaagccgac
cgcatgctggatatgggttttgcccaggatatcgaaaccatcgccggtgaaactcgctgg
cgcaagcagactatgctgttctccgcgacgctggaaggcgatgcgatcaaagactttgct
gagcgtctgctggaggagccggttgaagtttccgccaatccgtcaacccgcgagcgtaag
aaaatccatcagtggtactaccgcgccgacgatatcgaacataaaaccaaactgctggtg
aatctgctgcaacagccggaagccacccgcgctatcgtgtttgtgcgtaagcgtgagcgc
gtgcatgagctggctaactggctgcgtgaggccgggattaacacctgctggctggaaggc
gagatggtgcaggccaagcgaaacgaagctatcaagcgcctgaccgacggccgcgtcaac
gtgctgatcgccaccgacgtcgctgcccgcggtatcgatattccggacgtcagccacgtc
tttaacttcgatatgccgcgtaccgcggatacctacctgcaccgtatcggtcgtaccggc
cgcgccggtaaaaaagggaccgccatttctctggtcgaggctcatgaccacctgctgctg
ggtaagattggtcgctatattgaagagccgttgaaagccagagttatcgatgaactgcgc
ccgacgacccgtgcgccgagcgagaagctgacgggtaagccatcgaagaaagtgctggcg
aagcgtgcgcagaagaaaaaagatgaaaaagagaaaccgcgggtgaagaagcgccaccgc
gatacgaaaaatatcggtaagcgccggaagccaagcgcggccgggacgccatcagcgtcc
agcgatgagtaa
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