Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_4497
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Entry
KP1_4497 CDS
T00910
Symbol
recD
Name
(GenBank) exonuclease V alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kpu
Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)
Pathway
kpu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KP1_4497 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpu03400
]
KP1_4497 (recD)
Enzymes [BR:
kpu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KP1_4497 (recD)
DNA repair and recombination proteins [BR:
kpu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KP1_4497 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
Helicase_RecD
UvrD_C_2
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
nSTAND3
PhoH
AAA_28
AAA_16
MukB
T2SSE
CbiA
UvrD_C
SRP54
TrwB_AAD_bind
DEAD
AAA
ATPase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
BAH65003
LinkDB
All DBs
Position
complement(4309089..4310933)
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AA seq
614 aa
AA seq
DB search
MTFEQLLLAAVEQRLLRPLDVQFALMVAQNDPPAVKLAAALLSRDAGEGHVCLPLSRLSG
DEALSGKAGEIRDRLLAEAGAPEDWPALLLASSAVSCGDAPAPMILCGDRLYLNRMWRNE
LTVARFFNEANRVLEMDEARLASTLNALFPATGETDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALIQIEDSPRCRIRLAAPTGKAAARLTESLGAALRKLPLTDAQKALIPTE
ASTLHRLLGAQPGSQRMRYHAGNPLHLDVLVVDEASMIDLPMMSRLIDALPAHGRVIFLG
DRDQLASVEAGAVLGDICAWASSGYTAARAQELTRLTGSPVPAGEGAIAGALRDSLCLLQ
KSYRFGSHSGIGSLARAVNAGARAEVKATLRQPFDDIALHPLSTTEEYEAMLGAAQQGYE
RYLQLRRERAEPQAMLAAFSEFQLLCALREGPYGVSGVNERLEQRLNRQRAIALPRHSRW
YDGRPIMISRNDSALGLFNGDIGIALERNGELRVWFLMPDGAIKSVQPSRLPEHDTAWAM
TVHKSQGSEFEHAALILPARSVPLVTRELVYTAITRAKRRLSLYADEQVLSQAIVTRTER
RSGLAEIFAGREAP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaacaactactgctggcggcggtggagcagcgtctgctgcggccgctggac
gtccagtttgccctgatggtggcgcaaaacgacccgccggcggtcaagctggcggcggcc
ttgctgagccgggatgccggcgaggggcacgtctgtctgccgctctcgcggttgagcggc
gacgaggcgctgagcggtaaagccggggagatccgcgatcggctgctggccgaagccggc
gcgccggaggactggcccgcactgctgctcgcttcgtcggcggtgagctgcggtgatgct
ccggcgccgatgattttgtgcggcgaccggctctatctcaaccggatgtggcgcaacgag
ctgaccgtcgcccgcttcttcaatgaagccaaccgggtgctggagatggatgaggcccgg
ctggcgtcaaccctgaatgccctgttccctgccaccggcgaaaccgactggcaaaaagtg
gccgcggcggtggcgctgacccgccgcatctcagtgatctccggcggtcccgggaccggg
aagaccaccaccgtggcgaagcttctggcggcgctgatccagatcgaagatagtccgcgc
tgtcgtattcgcctggcggcgccaaccgggaaagcggcggcgcgtctgaccgaatcgctg
ggcgcggcgctgagaaaattgccgctgaccgacgcgcagaaagcgttgattcccaccgag
gccagcacgctgcatcgtctgctgggcgcccagccaggcagccagcggatgcgctatcac
gccggcaacccgctgcatctggacgtgctggtggtggatgaagcctcgatgatcgacctg
ccgatgatgtcgcggcttatcgacgcgctgccggcccacgggcgggtgattttcctcggc
gatcgcgaccagctggcctccgtagaagcgggggcggtgctgggggatatctgcgcctgg
gcgagttcgggctataccgccgcgcgggcgcaggagctgacccggctgaccggttcgccg
gtgccggcgggcgagggggctatcgcgggcgcgctgagagacagtttgtgcctgctgcaa
aagagctatcgcttcggtagtcactccggcatcgggagcctggcgcgggcggtgaacgct
ggcgcgcgcgcggaggtgaaggccacgctgcgccagccgtttgacgatatcgcgcttcat
cccctcagcacgaccgaagagtacgaagccatgctcggcgcggctcagcagggctatgag
cgctacctgcagctgcgccgcgagcgggccgaaccgcaggccatgctggccgctttcagc
gaattccagctgctgtgcgcgctgcgcgaggggccgtacggcgtgagcggcgtcaatgag
cggctggagcagcggctcaaccgccagcgggcgatcgccctaccgcgccactctcgctgg
tatgacggccgaccgatcatgatatcgcgcaacgacagcgcgctggggctgtttaacggc
gatatcggcatcgccctggagcgcaacggcgagctgcgggtgtggttcctgatgcccgac
ggcgccatcaagtcggtgcagccgagccgtctgccggagcatgataccgcctgggcgatg
accgtgcataaatcgcagggctcggagttcgaacacgcggcgctgatcctgccggcgcgc
agcgtcccgctggtgacccgcgaactggtctacacggcgatcacccgcgcgaaacggcgg
ttgtcgctctatgccgacgagcaggtgctctcccaggccattgtgacgcgcaccgaacgg
cgcagcggcctggcggagattttcgccgggcgcgaagccccctga
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