Kroppenstedtia pulmonis: GXN76_06460
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Entry
GXN76_06460 CDS
T06617
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03410
Base excision repair
kpul03430
Mismatch repair
kpul03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GXN76_06460 (recJ)
03430 Mismatch repair
GXN76_06460 (recJ)
03440 Homologous recombination
GXN76_06460 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpul03400
]
GXN76_06460 (recJ)
DNA repair and recombination proteins [BR:
kpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GXN76_06460 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GXN76_06460 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GXN76_06460 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
DUF3376
Motif
Other DBs
NCBI-ProteinID:
QKG84151
UniProt:
A0A7D4BPJ9
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All DBs
Position
1345001..1347391
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AA seq
796 aa
AA seq
DB search
MLKPKVRWQSVEVDESQIDILVDQLAVHPLVARLLVNRGIENPDEARSFLNVQLTELHDP
FSLDGMAEAVQRIRQAISNQEKILIYGDYDADGVTSTGIMMKTLRSLQGNVDYYIPNRFT
EGYGLNEEALRRAKESGVQLVITVDTGISAVQEAKLCKQIDLDLIITDHHEPPAILPEAW
AVINPKKENCSYPFDQLAGAGVSFKLAHALLDRVPEEWLEIAALGTIADLVPLINENRVL
AALGLKQMNQRQHVGLKALLEVSGVEGEVSAGHVGFSLGPRINASGRLDSAGQAVELLLT
EDPDEAREIAGNLDQMNRERQRLVETITEEASAMVEADPERHQRFIIVAAPGWNVGVIGI
VASRLVERYYRPTIVLGIDEETGMAKGSARSIVGLDIFQALSQCADLLPHFGGHEMAAGM
SLPQENLPALHSRLNDVAASCLKDEDYIPLSKVDAQLKLEEISLDLIEELEQLSPYGMGN
PTPRFRIAEAEVSKMQQIGRDQNHLKVNLKHDSYTLDAVGFRLGELAEEIAPSARLEVLG
ELTVNEWNNRRAPQLLIRDLHVPHRQIFDWRSNGDQTERFRRLAYRKDVLFLSRQPLEDR
LKSEDHNALFRLWQHHLDDSDHRELEKVQYVVLADLPPSEDTFITWLRSFPHLRRIYFAY
GDREMESALSQTPDREQFKHLYAFLRSHKGISPRRDLHRLAQLTGLSPKWVRFMLQVFQE
LDFVRITKGQLEVVQQTGKRSLSESGLYTLQQNRDKIQELFIYSSHRDLCSYISSVLSAE
SSLGGSTEWTSKKKSG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaccgaaagtgcgatggcaatcggttgaagtggatgagtcccaaatcgatatc
ttggtggatcaattggctgtgcatcctctcgttgcccgtttgttagtaaaccgggggatt
gagaatccggatgaggcccgttcatttttgaatgttcaactgacggaactgcatgacccg
ttttccttggatgggatggcagaggcggttcaacgcatccgacaagctatttccaatcag
gagaaaatcctgatctacggggattatgatgcagatggtgtcacgagtaccggcatcatg
atgaaaacgcttcgttctcttcaagggaatgttgactactacatacccaaccgttttacg
gaaggatacggtctgaatgaagaagctcttcgccgggccaaggaatccggtgtgcaattg
gtgatcaccgtggacaccggaatcagtgcggttcaggaggcaaagctttgtaaacagatc
gacctggatctgattattacagaccaccatgagcctcccgctattttgccggaggcttgg
gcagtgatcaaccccaaaaaagagaactgttcctatccctttgatcagcttgcaggggct
ggagtctcttttaaactggcacatgccttactggacagagtgccggaggaatggttggag
attgcggctttgggtaccatcgccgatttggttcccttgatcaacgagaatcgggtgctt
gccgctttaggcttaaagcaaatgaatcagcgccagcatgtaggactgaaagccttgctg
gaagtatccggagtagagggagaagtaagtgcgggccatgtgggtttttctctgggtccc
cgtatcaatgccagcggtcgtttggattccgccggacaggcggtggaactgttattgaca
gaagaccctgatgaagctcgggaaatcgccggaaatttggatcagatgaatcgggagcgt
caacgattggtggagacgattaccgaagaggcttccgccatggtggaagcagacccagag
cgtcatcaacggtttattatcgtggcggctccaggttggaatgtgggtgtgatcgggatc
gttgcctctcgattggtggaacgttattaccgtcctaccattgtattgggaatagatgag
gaaaccgggatggctaaaggttcagcccgcagcattgtcggcttggacattttccaggct
ttgtcccagtgtgctgatcttttgccgcactttggaggtcacgaaatggccgcaggcatg
agcctgccccaagaaaacctgccggcattgcatagccggttaaatgacgtggcagcttca
tgcttaaaggatgaagattacattccgttatccaaagtggatgcccagttgaaattggaa
gaaatcagtttggatctgatcgaggaattggaacagctgtctccttatggaatggggaat
ccgactccccgctttcgaatcgcagaagctgaagtgtccaaaatgcaacagatcggtcgg
gatcaaaatcatttgaaggttaacttgaaacatgattcatacacattggatgcagtgggt
ttccgtttgggagagttggcggaggaaatcgctccctctgcaagattggaagttttggga
gaactgacggtaaatgaatggaataatcgaagagctccccagttattgatccgggatctt
catgtgcctcacagacaaatctttgactggcgaagcaatggcgatcaaactgagcgattt
cgccgtttggcatatcgaaaggatgtcttgttcttgtctcgtcagcctttggaagatcgg
ctgaaaagtgaagatcacaacgccctttttcggctatggcagcatcaccttgatgactca
gaccatcgggagctggagaaagtacagtacgtggtgttggcggacttgcctccatctgag
gatacatttattacgtggcttcgatcttttccccatctccgacgaatctattttgcatat
ggggatcgggaaatggagagtgccttatcccagacaccggatcgtgaacagtttaaacac
ttgtatgcttttctgagatcccataaaggaatcagtcccagacgtgatttgcatcgactg
gcacaattgacgggtttatctccaaagtgggtgcggtttatgcttcaagtgtttcaggaa
ctggactttgtccgaattacaaaaggacagctggaagtggttcaacagacgggaaaacgt
tccctgagtgagtccggtctgtatacccttcaacaaaacagagacaagattcaagaactc
tttatctattcctcccaccgggatctgtgttcttatatttcttcggtcctgtcagccgaa
tcaagtttaggaggatcaacagaatggacttcaaagaaaaaatccgggtaa
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integrated database retrieval system
