Kroppenstedtia pulmonis: GXN76_08590
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Entry
GXN76_08590 CDS
T06617
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXN76_08590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpul03019
]
GXN76_08590
03009 Ribosome biogenesis [BR:
kpul03009
]
GXN76_08590
Enzymes [BR:
kpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
GXN76_08590
Messenger RNA biogenesis [BR:
kpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GXN76_08590
Ribosome biogenesis [BR:
kpul03009
]
Prokaryotic type
rRNA helicases
GXN76_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
DUF5572
AAA_19
CMS1
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
QKG84527
UniProt:
A0A7D3XQ75
LinkDB
All DBs
Position
complement(1791157..1792740)
Genome browser
AA seq
527 aa
AA seq
DB search
MKTFDSFDLDPSIIKGIRDMGFEEASPIQEECIPAVLRGEDVIGQAQTGTGKTAAFGIPL
LEHVDPNRRKVQSVVLAPTRELAIQVSEELRKIGRSKRVFTLPIYGGQSIGRQIKALKQG
VHVVIGTPGRMLDHLRRGTLRLDDVEIMVLDEADEMLDMGFIDDIESVMKYLPDQRQLLL
FSATMPPGIRHLARKYMKKPRYITVSRGEVTAPVIEQVFYKVLENGKLDSLCRILDSEDV
AQGILFGRTKKGVDDLAEALQARGYLAGGLHGDLAQQQRDRVMNAFRRGDIELLVATDVA
ARGIDVGSISHVINYDIPQDAESYVHRIGRTGRAGRTGIALTLVTPREMKQLRSIEQEIG
SRLTPRELPTLEEVAERQQQVLAEQLVETMQEGEPIPLFKEIVDNLSAEHDPASVAVAAL
HLAFADRFTSGNDAVYDFGETGASPGMVRFFINVGRNANIRPPELVKAIAEQAGIAAKKV
GRINIYDRFSFVEVPEEAAPFVFEALRQTKINGARVNLEPARPRNRN
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgaagacatttgattcctttgatttagatccttcgattattaaaggtatacgtgatatg
gggtttgaagaggcctccccgattcaggaagaatgcattcctgcagtattgagaggggaa
gatgtgatcgggcaggctcagacaggaaccgggaaaacagcggcttttggtattccgctg
ttggagcatgtcgatcccaaccgacgcaaggtccaaagtgtggttctggctcccaccagg
gagctggctatacaggtatccgaggagttgcgtaaaattggacggtccaagcgtgttttt
actttgccgatctatggcgggcaatccatcggcaggcaaattaaggctctgaagcaggga
gttcatgtggtgatcgggactccgggtcggatgttggaccatttgcgacgtggcacgctt
cgtttggatgatgtggagatcatggttttggatgaagccgatgagatgttggacatgggt
tttatcgacgatatcgagtctgtgatgaagtatttacctgatcagcggcaattgctctta
ttttccgctaccatgccaccgggaatccggcatttggcccgaaagtacatgaagaaaccc
cgttatattacggttagtcgtggagaggttaccgcaccggttattgaacaggtattctat
aaggtgttggaaaatggcaagctggactcattgtgtcgaattttggacagtgaggatgtg
gcgcaaggtattctttttggtcgaaccaaaaaaggagtggacgacctggcagaagcgttg
caagccaggggatatctggcggggggattacacggagacctggcccagcaacagcgtgat
cgggtgatgaatgcatttcgcagaggagatatcgaactgctggttgctaccgatgtagcc
gctcgtgggattgacgtagggagtatctcccatgttatcaattacgatatccctcaggat
gcggaaagttatgttcaccgtattggcaggacaggtcgtgccggtcggaccggaattgcc
ctgacattggtaactccacgggaaatgaagcaactccgttccattgaacaggaaatagga
agtcgtttgactccccgggaattgccgacattggaagaagtggcggagcgccagcaacaa
gtgttggccgagcaattggtggaaacgatgcaggaaggggaacccatccccctgtttaag
gaaattgtggacaacttgtctgctgaacatgatcctgccagtgtagcagtggctgcattg
catttggcttttgcagatcgcttcacctccggcaatgatgcggtgtatgactttggtgaa
acaggcgcttctccgggaatggtccgtttctttatcaatgtagggcgcaatgccaatatt
cgcccgcctgagctggtgaaagcgattgcggagcaggcaggcattgccgctaaaaaagtg
ggtcggatcaacatctatgaccgattttcatttgtggaagtgccggaagaagctgcaccg
tttgtgtttgaggcgcttcgtcaaacaaagataaacggagcacgggtcaacctggaaccg
gcgcgcccccgaaatcgcaattaa
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