Kroppenstedtia pulmonis: GXN76_08685
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Entry
GXN76_08685 CDS
T06617
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXN76_08685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpul03019
]
GXN76_08685
Messenger RNA biogenesis [BR:
kpul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXN76_08685
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GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Motif
Other DBs
NCBI-ProteinID:
QKG84544
UniProt:
A0A7D3XIH9
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Position
complement(1813834..1815513)
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AA seq
559 aa
AA seq
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MTKNNSRSKLSIFALGGLDEIGKNMYVVQYGDDIAVIDSGLMFPEEEMLGIDVVIPDITY
LVENRDKVRGILITHGHEDHIGGLPYILRELNVPVYGTKLTMGLVEHKLREAHMLNQTKR
ILINNRSEVRLGSMKATFFNTNHSIPDSVGVSIETPEGCVVHTGDFKFDMTPVNDQTADM
HKMAEIGNKGVLCLLSDSTNAERPGFTGSERNVGEALDEVFRTSKQRVIVATFASNIHRV
QQVVDASHKHNRKLAVVGRSMVNVVNIGMELGYLRVPSDLLIDPDEINRLPAHRVAVMST
GSQGEPMSALTRMAHGSHRKIEILPGDTVILAATPIPGNEKLVSRIVDQLFRVGANVIYS
SSGQHGVHVSGHGSQEDLKLMLNLMKPKFFIPIHGEHRMLRAHGQLAEMTGVRPENIFIC
DNGDVVEFSGGKARYGSKVAAGNVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKS
NGKILSGPDIISRGFVYVRESEKLLEEANRIVTQTMEKCANEQVSEWASLKTSIRDALSR
FLHDQTRRRPMILPIIMEV
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaaaaacaactcacgtagcaaactatccatatttgctctcggtgggttggatgaa
atcgggaaaaatatgtacgtggtgcagtatggggatgatattgccgtcatcgattccgga
ttgatgtttcccgaagaagagatgctgggaatcgatgtggtgatacccgatattacgtac
ttggtggaaaaccgcgataaagtgcgggggatcctcatcactcatggacatgaggatcac
atcggcggacttccttatattttgcgtgagcttaatgttccggtctatggtaccaaactg
acaatgggattggtggagcacaaactccgggaagcacatatgttgaatcagacgaaacgg
atcctgatcaacaaccgttccgaagttcgtttgggttctatgaaagccacttttttcaat
acaaaccacagtatcccagattcagttggagtgagcatcgaaactccagaggggtgtgtt
gtgcatactggcgattttaaatttgatatgactccggtcaatgatcaaactgccgacatg
cataaaatggctgaaataggaaataaaggggttctttgccttctttcagacagtaccaat
gcagaacgtcccggatttacaggttcggaacggaatgtgggagaagccctggatgaggtg
tttcgtacatcgaaacagcgggttattgtagcgacatttgcctccaatatccatcgggtt
cagcaagtggttgatgcttcacataagcataaccgtaagctggctgtggtaggacgcagt
atggtgaacgttgttaacatcgggatggagttggggtatctgcgggtaccttctgaccta
ttgatcgaccctgatgaaattaaccgtttgcctgctcaccgagtggcagtcatgtccacg
ggaagtcaaggtgagccgatgtctgctttgacccggatggcccatggttctcaccgcaag
atcgaaattctgcctggtgatactgtcattttggcggcaacaccgattcccggtaacgaa
aaattggtctcccgcattgttgaccaattgttccgggttggagccaatgtgatatacagc
agctctggacagcatggtgtgcatgtctccggacatggttcccaagaagatttaaagctc
atgctcaatctaatgaagcctaaattttttatcccgattcacggtgagcatcgtatgtta
cgggctcatggccaacttgccgaaatgacaggtgttcgaccggaaaacatctttatatgc
gacaatggggatgttgtagaattctccggcggaaaagcgcgttatggttctaaagtcgcg
gcgggtaatgtcctgatcgatggattaggtgtaggagatgttggtaatatcgtattaaga
gacaggaaactcctgtctcaagacggaattttagtagttgtggtcaccctcagcaaaagt
aacggaaagattttgtccggaccggatatcatctcccgcggcttcgtctatgtacgcgaa
tctgaaaaattgttggaggaagccaaccgcattgtcacccaaacgatggaaaaatgcgcc
aatgaacaagttagtgaatgggcgtcactcaaaaccagtattcgagatgccctgagtcgt
ttcttgcatgatcaaacccgacgccgtcccatgatccttcccattatcatggaagtatga
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