Kroppenstedtia pulmonis: GXN76_08870
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Entry
GXN76_08870 CDS
T06617
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kpul
Kroppenstedtia pulmonis
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpul03032
]
GXN76_08870 (topA)
03400 DNA repair and recombination proteins [BR:
kpul03400
]
GXN76_08870 (topA)
Enzymes [BR:
kpul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GXN76_08870 (topA)
DNA replication proteins [BR:
kpul03032
]
Prokaryotic type
DNA Topoisomerases
GXN76_08870 (topA)
DNA repair and recombination proteins [BR:
kpul03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GXN76_08870 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Zn_ribbon_TFIIB
zf_Rg
Motif
Other DBs
NCBI-ProteinID:
QKG84578
UniProt:
A0A7D4CN51
LinkDB
All DBs
Position
complement(1853532..1855607)
Genome browser
AA seq
691 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGRKYIVKASMGHVRDLPKSQLGVDTKHQFEPKYITIRGK
GDVLKELRDARKKVKRVFLAADPDREGEAIAYHLAHSLNLEMDDECRVVFNEITKQAVQE
AFKNPRKINLDLVQAQQARRILDRLVGYGISPVLWKKVKKGLSAGRVQSVAVKMVIDREK
EIRNFEPEEYWTVTAILLANNEEFEAKFHGYGKKKTPLKSEDDVKKLLEAIKGKRFVVES
VKKSERRKNPAPPFITSSLQQEAARKLNFRAAKTMAVAQQLYEGVGLSKKEGTVGLITYM
RTDSTRISATAQEEAGKYIKEKFGNAYLPNKPRSHKKKTGSQDAHEGIRPTSALRTPDQM
KPYLSRDQMRLYKLIWERFIASQMAPAVMDAIAADIQVGEALFRATGSKVKFPGFMKVYV
ESQDDRKKEENKYLPELEPNQRVKRKSIDPKQHFTQPPPRYTEARLVKTLEEKGIGRPST
YAPILDTIQKRGYVVLEDKRFVPSELGEIVISLMEEFFPEILNVEFTVQMEEELDHVEEG
KVNWVEILERFYEKFEKRLEVAEEEMKEIEIKDEVSDETCEKCSKPMVYKFGRYGKFLAC
SGFPDCRNTKPIVKSTGVTCPRCNQGEIVERKSKKKRTFYGCNRYPECEFVSWDKPDPRP
CPKCKGMLVEKRRKKGTLIQCTQCDFSEEKN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggccgattccctggttattgtggaatcacccgccaaggccaaaaccatcggaaagtat
ttgggccgaaaatatattgttaaggcctcgatgggacatgtgcgggatttgcccaagagt
cagttgggagtggatacaaaacatcaatttgaaccgaaatatattaccattcgcggaaag
ggtgatgtattgaaagaactgcgggatgcccggaaaaaagtgaaacgggtttttctggca
gcggacccggaccgggaaggtgaagcgattgcttatcatcttgctcacagtctaaatttg
gagatggatgatgaatgcagggtggttttcaatgagattaccaagcaagctgtgcaggaa
gctttcaaaaatccacggaaaatcaatctggacctggtacaggcccaacaggcacggcgg
attttggacaggttggtgggctatgggatcagtccggttttgtggaagaaagtaaaaaaa
ggcctgagtgccggacgggtgcaatccgttgcagtcaagatggtgatagacagggaaaag
gaaatccgaaacttcgagcctgaggaatattggaccgttactgctatattattggcgaat
aatgaggaatttgaagccaagtttcatggatatggaaaaaagaaaacccctttaaaatcg
gaagatgatgtgaagaagttgttggaggccattaagggcaaacgctttgtcgtggaatcc
gtaaagaagagtgaacgacgtaaaaatccagctcctccttttatcaccagctctttacaa
caggaagccgcccgtaagctgaatttccgggcagcaaagaccatggctgtggctcagcaa
ttgtatgagggcgtggggctgagcaaaaaagaaggaaccgtggggttgatcacctacatg
cggacggactccacccggatttccgctacggcacaagaagaagcggggaaatacataaag
gagaagttcggcaatgcttatttgcccaacaagccccgttctcataaaaaaaagacaggg
agccaggatgctcatgaaggaatccgtcccacttccgctcttcgtactccagaccagatg
aagccttatctgagccgggatcaaatgcggctttataagctgatctgggagcggtttatt
gccagccaaatggctcccgcagtcatggatgcgattgcggcagatatccaggtgggggag
gctctgtttcgggctaccggttccaaagtgaagtttcccggttttatgaaagtgtatgtg
gaaagtcaggatgatcgcaaaaaagaagaaaacaaatacttgccggagttggaacccaat
caacgggtgaaaagaaaatccattgaccccaaacagcactttacccagcctccacctcgc
tatacggaagcccggctggtgaaaaccttggaggaaaagggaattggtcggcccagtacc
tatgctcccatcttggataccattcagaaacgcgggtatgtggtgttggaggataagcgt
tttgttccttctgaactgggagagatcgtcatctctttaatggaggaatttttcccggaa
atcctgaatgtggagtttacggtacagatggaagaagagctggaccatgttgaggaagga
aaagttaactgggtggagattttggaacgcttttatgagaagtttgaaaagcggctggaa
gtggcagaggaagaaatgaaagagattgagattaaagatgaagtatcggatgaaacatgt
gaaaagtgcagtaagccaatggtatataagttcgggcgttacggtaagttcctggcttgc
tccggatttcccgattgtcgcaataccaagcccattgtcaaatccactggtgtcacgtgt
ccccggtgcaaccagggtgaaattgtggaacgaaagagtaaaaagaaacgtactttttac
gggtgtaaccggtaccctgagtgcgaatttgtctcctgggataaaccggatccccgaccc
tgccccaaatgcaagggaatgttggtagagaagagacgtaaaaaaggaaccctgatccaa
tgtactcaatgcgatttttctgaggaaaaaaactga
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