Kroppenstedtia pulmonis: GXN76_10915
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Entry
GXN76_10915 CDS
T06617
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GXN76_10915 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpul03021
]
GXN76_10915 (rpoD)
Transcription machinery [BR:
kpul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXN76_10915 (rpoD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
tify
Motif
Other DBs
NCBI-ProteinID:
QKG84928
UniProt:
A0A7D3XSA6
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All DBs
Position
complement(2317477..2318598)
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AA seq
373 aa
AA seq
DB search
MANEQNVDVEQELTLEQVKDQLADLGKKRGVLTYKEIMEKMSSFDQDPQQMDEFFETLND
QGIEVINEDEDSIDFNRNEDHADDNEVAEDDLSVPPGVKINDPVRMYLKEIGRVPLLSAA
EEVELAERIEAGDEEARRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKF
DYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPT
PEEIAGEMDLSPEKVREIMKIAQEPVSLETPIGEEDDSHLGDFIPDDDAQAPADAAAYEL
LKEQLKDVLDTLSDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLR
HPSRSKRLKDFLE
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaatgagcaaaatgtggatgtggaacaagagctcactttggaacaagttaaggat
cagttagcagacctcggtaaaaagcgtggggtcctcacctataaagaaatcatggaaaag
atgtcctcatttgaccaggatccacaacagatggatgaattttttgagacgttgaacgat
caaggcattgaggttatcaatgaagatgaagacagtatcgacttcaatcggaatgaagat
cacgccgacgataacgaagtggcggaggacgatctgagtgtacctccaggtgtgaagatt
aacgatccggttcggatgtatttgaaggaaattggccgggttccgttattatccgccgca
gaggaagtggaactggctgagcggattgaagcaggggacgaagaagcaagacggcgtctg
gcagaagcgaacttacgccttgtggttagtattgccaagcggtatgtcggtcggggcatg
ttgtttcttgacttgatccaagaaggaaacatgggcttgatcaaagcagttgagaagttt
gattaccgtaagggattcaagttcagcacttacgccacctggtggatccggcaggccatc
acacgggccattgccgatcaggcacgaacaatccgaattccggttcacatggtggagacg
attaacaagttaatccgtgtatcccgtcaattgcttcaggagttgggaagagaacccaca
ccggaagaaatcgctggtgaaatggatttaagtccggaaaaagtaagggaaatcatgaaa
atcgcccaagaaccggtatccctggagacacccatcggagaagaggacgattctcacctc
ggggattttattcccgatgatgatgctcaggcaccggcagatgcggcagcatatgaattg
ttgaaggaacagttgaaagatgttctggatacactttcagaccgggaggaaaatgtgctc
cgtctgcgttttggattggatgacgggcgcactcgtacgctggaagaagtagggaaggta
tttggagtcacccgagagcgaattcgacagatagaagctaaggcacttcgtaaactgcgg
catcccagtcgaagtaaacgattaaaggattttcttgaataa
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