Kroppenstedtia pulmonis: GXN76_14895
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Entry
GXN76_14895 CDS
T06617
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kpul
Kroppenstedtia pulmonis
Pathway
kpul03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpul00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GXN76_14895 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpul03021
]
GXN76_14895 (rpoC)
03400 DNA repair and recombination proteins [BR:
kpul03400
]
GXN76_14895 (rpoC)
Enzymes [BR:
kpul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GXN76_14895 (rpoC)
Transcription machinery [BR:
kpul03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GXN76_14895 (rpoC)
DNA repair and recombination proteins [BR:
kpul03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GXN76_14895 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QKG85605
UniProt:
A0A7D3Y6J0
LinkDB
All DBs
Position
complement(3087411..3091025)
Genome browser
AA seq
1204 aa
AA seq
DB search
MLDVNNFEFMKIGLASPNKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVVDPGATPLEKKQLLSEKEYRGYREKYGNAFTAMMGAEAIKRLLL
DIDIDREVGILKEEMQTAQGQRRTRAVKRLEVLEAFRHSGNEPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDSLIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPSLKMYQCGLPKE
MALELFKPFVMKELVAKGLAHNIKSAKRKVERVHPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGSYYLTLEKEGAPGEGMVFSTVGEAINAYQQGAVTLHSRIAVP
AKVLDKPSFTEKQKKGLLMTTVGKLIFNEIFPREFPYINEPTQTNLSMGTPDKYFVFDKG
TNLKETIRNLPDPGAVKKGFLGTIISECFRRFGTKETSVLLDNIKSLGYSYSTKAGITMS
VSDVVVPEEKQKILNEADQKVQMVLKQYRRGLITEDERYERVISIWSQAKDDITDVLMNQ
LGKFNPIYMMANSGARGNVSQITQLAGMRGLMANPSGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGLAVSQIQDGNEVIEEL
YDRIVGRMAFKTVRHPQTKEVIVERNQLIDEELARQIIEAGIQEVEIRSVLNCRTQHGVC
RKCYGRNLALGTHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATITEIAGKVIDIREVKDRREIEIEGEVESKTYQVPMASRMRVSVEDVVEA
GDELTEGSVDPKELLRIKGVRGVQEYILQEVQKVYRLQGVEINDKHVEVMIRQMMRKVRI
TEAGDTDLLPGAIADLHEYEKANQKVLLDGGEPAVARPILLGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMSRYRNLGVEHNEKDAPETGEADT
VLVD
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
gtgctagacgtcaacaattttgagtttatgaaaataggtcttgcgtcccccaacaagatt
cgctcctggtccagaggggaagtcaaaaagccggaaacgatcaactatcggacactcaaa
ccggaaaaagaaggtttgttttgcgaaaaaatctttggacccaccaaggattgggaatgt
cactgcggcaagtacaagcgggttcggtataaaggtgtggtctgtgatcggtgtggggtg
gaagtaacccggtccaaagtacgtcgggagcggatggggcatattgaattggccgctccg
gtttcccacatctggtacttcaaagggatccccagccgaatgggactggttttggatatg
tcgccccggtccctggaggaagtgatctattttgcttcctatgtcgtggtggatcctggg
gcaactcccctggaaaaaaagcaattgctttctgaaaaggagtaccggggttaccgcgaa
aaatacggaaatgcctttacggcgatgatgggggccgaggcaatcaagcgccttctgttg
gatatcgatatagaccgggaagttggcatcttgaaagaagagatgcaaacagcccaggga
cagcggcgtacccgtgctgtcaaacgcttggaagtactggaagctttccggcattccggc
aatgagccggactggatggttctggatgtattgccggtgattcctccggagcttcgcccc
atggtgcaactggatgggggacgttttgccacatcggatctgaacgatctgtaccgtcgg
gtgatcaaccgaaataatcggttgaagcgtttgctggacttaggtgcaccggatattatc
gttcagaatgagaagcggatgctgcaggaagcggtggactccttgatcgataatggccgt
cgaggccgcccggtcaccggtcccggcaatcgccctcttaagtccctgtcccatatgctg
aaagggaagcaaggacgatttcggcaaaacctgctggggaaacgggtggactattccggc
cgttccgtgattgtcgtcggccccagcctgaaaatgtaccaatgcggtttgcccaaggaa
atggctttggagctgtttaaaccctttgtcatgaaagaactggtggcgaagggactggct
cataacatcaaatccgccaagcggaaagtggagcgtgtacacccggaagtatgggatgta
ttggaagaggttatcaaggaacatcctgttttgttaaaccgggctcccactcttcaccgt
ttggggattcaggcctttgaaccgattctggtggaaggccgggccattcgattgcacccc
ttggtttgtaccgcctacaatgccgactttgacggagaccaaatggcggttcacgttcct
ctgtctgcagaagcccaggctgaagcccgcttgctgatgctggcagcccaaaacattttg
aaccctaaagacggcaagcctgttgtcactccttcccaggatatggttctgggcagttat
tacctgaccttggagaaggaaggagcccctggtgaaggaatggtcttctccacagtggga
gaagcgatcaatgcttaccaacagggggctgtcaccttgcactcccggattgccgttccc
gcaaaagttctggataaaccctcctttacggagaaacagaaaaaaggcttgttgatgaca
actgtcgggaaactgattttcaatgaaatctttcccagggagttcccctatatcaatgag
ccgacccagaccaacctttccatgggaacaccggataaatacttcgtctttgacaagggg
acgaacttgaaggaaacgattcggaacctgccggatcccggagccgtgaaaaaagggttc
ctgggaaccatcatctcggaatgtttccggcggtttggaaccaaggaaacatccgtgtta
ctggataacatcaagtcgttgggctattcctattccaccaaagccggaatcaccatgtcc
gtgtctgatgtggtcgtaccggaggagaaacagaaaatcctgaatgaggcggaccagaag
gtccaaatggtattaaaacagtatcgtcggggattgattaccgaggatgagcgatatgaa
cgggtcatctccatctggagtcaggccaaggatgacattaccgatgtgctcatgaaccag
ctgggtaaatttaatcccatttatatgatggccaactccggtgctcggggtaacgtatcc
cagattactcaattggcgggaatgcggggattgatggcgaacccctcaggacggattatc
gagttgccgattaagtccaacttccgggaagggctgacggtgctggaatactttatctcc
acccacggtgctcgaaaaggtcttgcggatactgccctgcgaacggcggactcgggatac
ctcacccgtcggttggtggatgtggcccaggatgtcattgtccgggaagaggattgtggt
accgacaaaggcttggctgtttcgcaaattcaggacggcaatgaagtgattgaagagctg
tatgaccggatcgttggtcgaatggcctttaaaacagtccgtcacccgcagacaaaagaa
gtgattgtggaacgaaatcagctgatcgatgaagagctggcccgccaaattattgaagcg
ggaatccaagaggtggaaatccgctccgttctcaactgccggacccaacacggcgtctgc
cgcaagtgttatggccgtaaccttgctttgggcacccatgtggaaatcggtgaagcggtg
gggattattgcggctcaatccatcggagaaccaggaacccagctgaccatgcgtaccttc
cacaccggcggtgtggccggggacgacatcacccaaggtttgccccggattcaggagctg
tttgaggcacggaacccgaaagggcaggccacgattactgaaatagccgggaaagtgatc
gatatccgggaagtaaaagatcgtcgggagatcgaaattgaaggagaagtggaatccaag
acgtaccaggttcccatggcctccagaatgcgggtatctgttgaagatgtagtggaagcc
ggagatgaattaacggaaggctccgttgatcccaaggaactgttgcggattaaaggtgtc
cggggtgtacaggagtatatcctgcaggaagtgcaaaaggtataccgtctgcaaggggtg
gagatcaacgacaagcacgtggaagtgatgatccggcagatgatgcgcaaagtccggatt
accgaagccggggatacggatctgctgcctggggcaattgctgacctgcatgaatatgaa
aaggcgaaccagaaagtgttgctggatggtggagaaccggcagttgcccgaccgattctt
ctggggattaccaaggcctccctggaaacggaatccttcctttccgccgcttccttccag
gagacgacacgtgttcttaccgatgcagcgattaaaggtaaggtggaccggttactcggc
ctgaaagagaatgtgattatcgggaaattggttcccgccggtacggggatgtcccgatat
cgtaacctgggtgttgagcacaatgagaaggatgcaccggaaacaggggaagcagataca
gttttggtggattga
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