KEGG   Kroppenstedtia pulmonis: GXN76_15640
Entry
GXN76_15640       CDS       T06617                                 
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kpul  Kroppenstedtia pulmonis
Pathway
kpul03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpul00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GXN76_15640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpul03021]
    GXN76_15640
   03019 Messenger RNA biogenesis [BR:kpul03019]
    GXN76_15640
Transcription machinery [BR:kpul03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     GXN76_15640
Messenger RNA biogenesis [BR:kpul03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     GXN76_15640
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N AAA_22 AAA_25 OB_RNB NACHT AAA ATPase_2 Mor S1CSD-TOTE-2 NB-ARC
Other DBs
NCBI-ProteinID: QKG85743
UniProt: A0A7D3Y3M6
LinkDB
Position
complement(3247121..3248386)
AA seq 421 aa
MEISLSDLENRRLTDLYKLAREYQITYYSQMKKKELIFAILKAKAEKAGLLFMEGVLDIL
PEGYGFLRPIHYLPSSEDIYISASQIRRFDLRSGDLVSGKVRPPKENERYFGLLHVEAVN
GEDPNSAAERLHFPALTPLYPQKRFILETEPQKLSTRIMDLIVPVGMGQRGLLVAQPKAG
KTMLLKEIANSITTNYPDVDLFVLLIDERPEEVTDMQRSVNGEVVSSTFDEMPENHIKVA
ELVLERAQRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGA
ARNVEEGGSLTILATALVDTGSRMDDVIYEEFKGTGNLELHLDRKLSERRIFPAIDIRRS
GTRREELLLPKKDLEKLWQLRKSLSEGVEYTESFLRKLGQTQSNEEFLASLDPQPRRSST
A
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggaaatctctttgagcgacttggaaaatcggcgcctaaccgacctgtataaattggcc
agggaatatcaaattacctactacagccagatgaaaaagaaagaacttatcttcgccatt
ttaaaagcaaaggcggaaaaggccggcctgttgtttatggaaggggtactggatattctc
ccggaaggatacggcttcttacggccgattcattacttaccctcctcggaagacatctat
atttccgcttcacagatccgtcgctttgacctgcgatccggagacctggtttccggaaag
gttcgccctcctaaagaaaatgaacgctattttggtctgttgcatgtggaagctgtcaac
ggtgaagatcccaactccgcagccgaacgcctccattttcctgcattgaccccgctgtac
cctcaaaaacgtttcatcttggaaacggaaccgcagaaactctccactcggatcatggat
ctgatagtgcctgtagggatggggcaaagagggttgctcgtggcccaacccaaggcgggt
aagacgatgctcctcaaggaaatcgccaacagtatcacaacgaattaccctgatgtggat
ctgtttgtccttttgattgacgaacgaccggaagaagtgacggacatgcaacgctccgtc
aacggagaagtcgtaagttccacttttgatgaaatgccggaaaatcatatcaaggtggcg
gaactggtgctggaacgggcccagcggttggtggagcacaaacgggatgttgtgattttg
atggacagcattacccgtttggccagggcatacaacttggttatccctcccagtggacga
accctgtccggtggtattgatccggctgcctttcatcgccccaaacgattttttggtgcc
gcccgtaatgtggaagaagggggcagtctcaccattttggccacggctttggtagatacg
ggttcccggatggatgatgttatttatgaagaattcaaaggaacgggaaatttggaactg
catctggatcgaaagctgtctgaacgacggattttcccggctatcgatattcgtcgctcc
ggtacacgtcgggaagagctgttgttgcctaaaaaggatttggaaaaactgtggcaattg
cggaaatccttaagtgaaggcgttgaatatactgagtcctttttgcgaaagctgggacaa
acccaaagcaatgaggagtttctggcttcattagaccctcagcccagacgctcttccaca
gcataa

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