Kitasatospora purpeofusca: ACFCLZ_22595
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Entry
ACFCLZ_22595 CDS
T11279
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kpur Kitasatospora purpeofusca
Pathway
kpur03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kpur00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACFCLZ_22595 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpur03021
]
ACFCLZ_22595 (rpoB)
03400 DNA repair and recombination proteins [BR:
kpur03400
]
ACFCLZ_22595 (rpoB)
Enzymes [BR:
kpur01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACFCLZ_22595 (rpoB)
Transcription machinery [BR:
kpur03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACFCLZ_22595 (rpoB)
DNA repair and recombination proteins [BR:
kpur03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACFCLZ_22595 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XHR61287
LinkDB
All DBs
Position
5268666..5272142
Genome browser
AA seq
1158 aa
AA seq
DB search
MAAPRNASNNSAASTAPLRVSFAKIKEPLEVPNLLALQTESFDWLLGNAAWKTRVEQALE
NGLDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKDRDFTFAAPLFV
TAEFTNNETGEIKSQTVFMGDFPLMTHKGTFVINGTERVVVSQLVRSPGVYFDSTLDKVS
DKDIFSCKVIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTNEMILEEFGEY
ESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVGRYK
VNRKLGNAESLDSGVLTEPDIINAIKYLVKLHAGEVDWRDETGRDIVVEVDDIDHFGNRR
LRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTSQLS
QFMDQTNPLSGLTHKRRLSALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNIGLI
GSLASYGRVNAFGFIETPYRKVVEGVVTEQVDYLTADEEDRYVIAQANAPLTADLHFAEP
RVLVRRRGGEIDYIPGTEIDYMDVSPRQMVSVATAMIPFLEHDDANRALMGSNMMRQAVP
LLKSEAPLVGTGMEYRCAVDAADVITAEKPGVVQEVSADYVTVANDDGTYTTYRAAKFTR
SNQGTAFNQKVLVDEGTRVEVNQVLADGPCTDEGEMALGKNLLVAFMSWEGHNYEDAIIL
SQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGADVV
TGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGESGKVIGVRVFDREE
GDELPPGVNQLVRVYVAQKRKITNGDKLAGRHGNKGVISKILPVEDMPFLEDGTPVDIIL
NPLGVPSRMNPGQVLEIHLGWLSKQGWDVSGLADEWAKRLQAIGADKVEGGTNLATPVFD
GAREDEITGLLDHTTLTRDGERLVNSTGKARLFDGRSGEPFPMPVSVGYMYILKLHHLVD
DKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDDVLG
RVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGQSIEMRDSDEDVFRAA
EELGIDLSRREPSSVEEV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcgccgcgcaacgcctcgaacaattccgccgcatccaccgccccgctccgcgtc
tccttcgcgaagatcaaggagcccctcgaggtcccgaacctcctggccctgcagaccgag
agctttgactggctgctcggcaacgcggcctggaagacccgggtcgagcaggcgctggag
aacggtctggacgtccccaccaagtccggtctggaggagatcttcgaggagatctcgccg
atcgaggacttcagcgggtcgatgtccctgaccttccgcgaccaccgtttcgagccgccg
aagaactcgattgacgagtgcaaggaccgcgacttcacgttcgcggccccgctcttcgtc
acggccgagttcaccaacaacgagaccggtgagatcaagtctcagacggtcttcatgggc
gacttcccgctcatgacccacaagggcacgttcgtgatcaacggcaccgagcgtgtcgtc
gtgtcgcagctcgtccgctccccgggtgtgtacttcgactccaccctggacaaggtgtcc
gacaaggacatcttctcctgcaaggtcatcccctcgcgtggtgcctggctggagatggag
atcgacaagcgcgacatggtcggcgtccgcatcgaccgcaagcgcaagcagtccgtcacc
gtgctgctcaaggccctcggctggaccaacgagatgattctcgaggagttcggcgagtac
gagtcgatgcgcgccaccctggagaaggaccacacccagggccaggacgacgcgctgctc
gacatctaccgcaagctgcgcccgggcgagccgccgacgcgcgaggccgcgcagacgctg
ctggagaacctgtacttcaacccgaagcgctacgacctcgccaaggtcggccgctacaag
gtgaaccgcaagctcggcaacgccgagtcgctggactccggtgtgctcaccgagcccgac
atcatcaacgcgatcaagtacctggtcaagctgcacgccggcgaggtcgactggcgtgac
gagaccggccgcgacatcgtggtcgaggtcgacgacatcgaccacttcggcaaccgccgc
ctgcgcaacgtgggcgagctcatccagaaccaggtccgtacgggtctcgcccgtatggag
cgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccgcagaccctg
atcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagccagctgtcg
cagttcatggaccagacgaacccgctgtcgggcctgacccacaagcgccgtctgtccgcg
ctcggccccggcggtctctcccgtgagcgcgccggcttcgaggtccgtgacgtgcacccc
tcgcactacggccgcatgtgtccgatcgagaccccggaaggcccgaacatcggtctgatc
gggtcgctggcctcgtacggccgggtcaacgccttcggcttcatcgagaccccgtaccgc
aaggtcgtcgagggcgtggtcaccgagcaggtcgactacctgaccgccgacgaggaggac
cgctacgtcatcgcccaggcgaacgccccgctgaccgcggacctgcacttcgccgagccg
cgcgtcctggtccgccgccgcggcggcgagatcgactacatcccgggcaccgagatcgac
tacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatcccgttcctc
gagcacgacgacgccaaccgcgcgctcatgggctcgaacatgatgcgccaggcggtgccg
ctgctgaagagcgaggccccgctggtcggcaccggcatggagtaccgctgcgccgtcgac
gccgcggacgtcatcaccgccgagaagccgggtgtcgtccaggaggtctcggccgactac
gtcaccgtggccaacgacgacggcacgtacaccacgtaccgcgccgccaagttcactcgc
tcgaaccagggcaccgccttcaaccagaaggtgctcgtggacgagggcacccgggtggag
gtcaaccaggtgctggccgacggcccgtgcaccgacgagggcgagatggccctcggcaag
aacctcctcgtggcgttcatgtcctgggagggccacaactacgaggacgcgatcatcctg
tcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggagcacgaggtc
gacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccgaacgtctcc
gaggaggtcctcgccgacctcgacgagcgcggcatcatccgcatcggcgccgacgtcgtc
accggcgacatcctggtcggcaaggtcaccccgaagggcgagaccgagctgaccccggag
gagcgcctgctgcgcgcgatcttcggcgagaaggcccgtgaggtccgcgacacctcgctg
aaggtcccgcacggtgagtccggcaaggtcatcggcgtgcgcgtgttcgaccgcgaggag
ggcgacgagctccccccgggtgtcaaccagctggtccgcgtctacgtggcccagaagcgc
aagatcaccaacggtgacaagctcgccggccgtcacggcaacaagggcgtcatctccaag
atcctgccggtcgaggacatgccgttcctggaggacggcaccccggtcgacatcatcctc
aacccgctgggtgtcccgtcccgaatgaacccgggacaggtcctggagatccacctcggc
tggctctccaagcagggctgggacgtctccggcctcgccgacgagtgggccaagcgcctc
caggcgatcggcgccgacaaggtcgagggcggcaccaacctggccaccccggtgttcgac
ggcgcccgcgaggacgagatcaccggtctgctggaccacaccaccctcacccgtgacggt
gagcgcctggtgaactccaccggcaaggcgcggctgttcgacggccgctccggcgagccg
ttcccgatgcccgtctcggtcggctacatgtacatcctcaagctgcaccacctggtcgac
gacaagctgcacgcccgctcgaccggcccgtactcgatgatcacccagcagccgctcggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggaggtgtgggcccttgaggca
tacggcgcggcctacgcgctgcaggagctcctcaccatcaagtccgacgacgtcctcggc
cgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagcccggcattccc
gagtccttcaaggtcctcatcaaggaaatgcagtcgctctgcctcaacgtggaggtgctg
tcctcggacggccagtccatcgagatgcgggactccgacgaggacgtcttccgcgccgcc
gaagagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagaggtctga
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