Kitasatospora purpeofusca: ACFCLZ_25750
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Entry
ACFCLZ_25750 CDS
T11279
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
kpur Kitasatospora purpeofusca
Brite
KEGG Orthology (KO) [BR:
kpur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpur03016
]
ACFCLZ_25750
Enzymes [BR:
kpur01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ACFCLZ_25750
Transfer RNA biogenesis [BR:
kpur03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ACFCLZ_25750
Prokaryotic type
tRNA splicing ligases
ACFCLZ_25750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
DUF4514
DUF7857
Motif
Other DBs
NCBI-ProteinID:
XHR61856
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All DBs
Position
5981524..5982717
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AA seq
397 aa
AA seq
DB search
MSYTEVPGVRVPIRMWTDPATVEGQAMQQLRNISSLPWLHGLAVMPDVHLGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTAKDLPDDLSRLRSRIEQAIPVGRGLHTDPVEPG
RLHGVPAAGWDDFWQRFDAVAPEVKWRRERAAQQLATLGGGNHFIEVCVDDTGAVWLMLH
SGSRNIGKELAEHHMGVAQSLPHNQGLIDRDLAVFVADTPQMAAYRQDLFWAQEYAKRNR
ALMMALFQDVVRREFPRAKVGFDEVISCHHNYVSEERYDGVDLLVTRKGAIRAGSGDYGI
IPGSMGTGSYIVRGLGNEASFNSASHGAGRKMSRSAAKKRFTMHDLAEQTKGVECRKDAG
VVDEIPGAYKPIEKVIEQQRDLVEVVAHLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacaccgaggtacccggcgtccgggttccgatccggatgtggaccgacccggcc
accgtcgagggccaggcgatgcagcagctgcgcaacatcagctcgctgccctggctgcac
gggctcgccgtgatgcccgacgtccacctgggcaagggggcgacggtgggttcggtgatc
gcgatgcgcggcgccgtctgcccggcggcggtcggcgtggacatcggctgcgggatgagc
gcggtgaagacctcgctcaccgcgaaggacctgccggacgacctgtcgcggctgcgctcg
cggatcgagcaggccatcccggtcggccgcggcctgcacaccgacccggtcgagccgggc
cggctgcacggcgtcccggccgccggctgggacgacttctggcagcggttcgacgcggtc
gcgcccgaggtgaagtggcgccgcgagcgggccgcccagcagctggcgacgctcggcggc
ggcaaccacttcatcgaggtctgcgtcgacgacaccggcgcggtctggctgatgctgcac
tccggctcgcgcaacatcggcaaggagctggcggagcaccacatgggcgtggcccagtcg
ctgccgcacaaccagggcctgatcgaccgtgacctcgcggtgttcgtcgcggacaccccg
cagatggccgcgtaccggcaggacctcttctgggcgcaggagtacgccaagcgcaaccgg
gcgctgatgatggcgctgttccaggacgtcgtccggcgcgagttcccgcgggcgaaggtc
ggcttcgacgaggtgatcagctgccaccacaactacgtgtcggaggagcgctacgacggc
gtcgacctgctggtgacccgcaagggcgcgatccgggccgggtccggcgactacgggatc
atcccggggtcgatgggcaccgggtcgtacatcgtccgcgggctgggcaacgaggcgtcg
ttcaactcggcttcgcacggcgcgggccggaagatgagccgcagcgcggcgaagaagcgt
ttcaccatgcacgacctggccgagcagaccaagggcgtggagtgccgcaaggacgcgggc
gtggtggacgagatccccggcgcgtacaagccgatcgagaaggtgatcgagcagcagcgg
gacctggtggaggtcgtcgcgcacctgaagcaggtggtctgcgtcaagggctga
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