Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_00670
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Entry
KPNIH29_00670 CDS
T03465
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Pathway
kpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNIH29_00670 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpv03021
]
KPNIH29_00670 (rho)
03019 Messenger RNA biogenesis [BR:
kpv03019
]
KPNIH29_00670 (rho)
Transcription machinery [BR:
kpv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KPNIH29_00670 (rho)
Messenger RNA biogenesis [BR:
kpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPNIH29_00670 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIX67164
UniProt:
A0A2X3GV80
LinkDB
All DBs
Position
142990..144249
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaagatatctttggcgacggcgtactggagatactgcaggat
ggatttggattcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgctcgc
gtactggatctggcctccccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcatacaaccacccg
gactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggcatcgcgtcacgtg
caggttgccgagatggttattgagaaagcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactctattacccgtctggcgcgtgcctacaacaccgtggttccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgtttc
tttggtgcggcacgtaacgtcgaggagggcggtagtctgaccatcatcgccacggcgctg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaat
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatggaattcctcatc
aataagctggcaatgaccaagacgaatgatgacttcttcgatatgatgaagcgctcgtaa
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