Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_04855
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Entry
KPNIH29_04855 CDS
T03465
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Pathway
kpv03030
DNA replication
kpv03430
Mismatch repair
kpv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KPNIH29_04855 (dnaE)
03430 Mismatch repair
KPNIH29_04855 (dnaE)
03440 Homologous recombination
KPNIH29_04855 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpv03032
]
KPNIH29_04855 (dnaE)
03400 DNA repair and recombination proteins [BR:
kpv03400
]
KPNIH29_04855 (dnaE)
Enzymes [BR:
kpv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KPNIH29_04855 (dnaE)
DNA replication proteins [BR:
kpv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KPNIH29_04855 (dnaE)
DNA repair and recombination proteins [BR:
kpv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KPNIH29_04855 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIX67922
UniProt:
A0A3F3CAK1
LinkDB
All DBs
Position
1012954..1016436
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTGHGA
GIKPIVGADFHVQCDLLGDEFTELTVLAANNTGYQNLTLLISRAYQRGYGALGPWIDRDW
LVEHQEGLILLSGGRKGDVGVSLIRGNMPLVEQCVAFYEEHFPDRYFLELIRTGRQDEEA
YLHAAVALAEARGLPVVATNDVRFLDTSDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAEKRPEYDQRLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEGPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgatcgatggg
ctggcaaagaccgggccgctggtgaagaaggcggcctcgcttggcatgccagcgctggcg
atcaccgatttcaccaacctctgcggactggtgaagttctacgggacgggacacggcgcg
gggattaagccgatcgtcggcgccgactttcacgtgcagtgcgacctgctcggcgacgaa
tttaccgagctgaccgtactggcggcgaacaacaccggctaccagaacctgaccctgttg
atttcccgtgcctatcagcgcggctacggcgccctggggccgtggatcgatcgcgactgg
ctggtggaacatcaggaagggctgattctgctctccggcggccggaaaggtgacgtcggc
gtcagcctgatccgcggcaatatgccgctggttgaacagtgcgtcgccttctacgaagag
catttcccggaccgctattttctggagctgatccgtaccggtcgacaggatgaagaggcc
tatctccacgccgccgtggcgctggcggaagcgcgcggcctgccggtggtggcgaccaac
gatgtccgctttctcgacaccagcgatttcgacgcccatgaaatccgcgtcgcgatccac
gacggctttacgctcgacgacccgaaacggccgcgcaactactcgccgcagcaatatatg
cgcagcgaggaagagatgtgcgagctgttcgccgatattccggaagcgctggcgaacagc
gttgaaattgccaagcgctgcaacgtcaccgtgcggcttggcgaatatttcctgccgcag
ttcccgaccggcgatatgaccacggaagatttcctggtcatgaaatcgaaagagggtctg
gaagagcggctggaattcctcttcccggatcctgccgtccgtgctgaaaagcgcccggag
tatgaccagcgtctggatattgaactccaggttatcaaccagatggggttcccgggctac
ttcctgattgtgatggagtttatccagtggtcgaaggataacggcgtgccggttggcccg
ggacgcggttccggcgccggttcgctggtggcctacgcgctgaagatcaccgatcttgac
ccgctggaattcgacctgctgttcgaacgtttccttaacccggagcgtgtctcgatgccc
gacttcgacgtcgacttctgcatggagaaacgcgaccaggttatcgagcacgtggcggat
atgtacggccgcgacgcggtatcgcagatcatcaccttcggtaccatggcggcgaaagcg
gtcatccgcgatgtcggtcgcgtgctgggtcacccgtacggatttgtcgatcgtatctcc
aagctggtgccgcccgatccgggcatgacgctggcgaaagcctttgaggccgagccgcag
ctgccggagatctacgaggcggacgaagaagtgaaagcgctgatcgacatggcgcgtaag
ctggaaggggtgacgcgaaacgccggtaaacatgccggtggggtagttatcgctccaacc
aaaatcaccgatttcgcgccactgtattgcgatgagcaggggctgcatccggttacccag
tttgataagaacgacgtggaatacgccgggctggtgaaattcgacttcctcggtctgcgt
acgctcactatcattaactgggcgctggagatgatcaacaagcgccgtgagaagaacggc
gaagggccgctggatatcgccgccatcccgctggatgacaagaaaagcttcgacatgctg
cagcgctcggaaaccaccgcggtcttccagcttgaatcgcgcggcatgaaagatctgatt
aaacgcctgcagccggactgcttcgaagatatgatcgcgctggtggctctgttccgcccg
ggcccgctgcagtcggggatggtagataactttatcgaccgtaagcatggccgcgaggag
atctcttatccggacgtgcagtggcagcatgaaagcctgaaaccggtgctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagattgcccaggtgctgtccggatat
accctcggcggcgcggacatgctgcgtcgtgcgatgggtaagaaaaagccggaggagatg
gccaagcagcgttctatctttgaggatggggcgaagaaaaacggcattgacggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccggttacggatttaacaaatcgcac
tccgccgcctacgcgttggtctcctaccagacgctgtggcttaaggcgcactacccggcc
gagtttatggcggcagtgatgaccgccgatatggacaacaccgagaaggtggttggcctg
gtggatgagtgctggcgaatggggctaaaaatcctgcccccggatattaactccggcctg
taccatttccacgtcaacgacgatggcgagatcgtctacggcattggcgccatcaagggc
gtcggcgaaggaccgatcgaagcgattattgaggcgcgcaacaatggcggctatttccgc
gagctgttcgacctctgcgcgcgaaccgatattaaaaagctcaaccgtcgggtgctggaa
aagctgattatgtccggggcgttcgatcgtctcggcccacatcgcgcggcgctgatgaat
tcgctgggcgatgcgttgaaagccgccgaccagcacgcgaaagccgaggccatcggccag
gctgatatgttcggcgtgctggcggaagagcccgagcaaattgagcaatcctacgccagc
tgccagccatggcctgagcaggtggtgctggatggtgaaagggagaccctggggctatac
ctcaccggacacccgattaaccagtatctgaaggagattgagcgctacgtcggcggcgtg
aggctcaaagacatgcatccgaccgaacgtgggaaagtcaccacggcggcggggctggtg
attgcggcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcggctggaagtgatgttattcaccgacgcgctggataaatatcagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgactttagc
ggggggcttaaaatgaccgcccgtgaagtcatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtgcacctctactatcag
agggcggatgcacgcgcgcggttgcgtttcggcgcaacatggcgcgtctctccgagcgat
cgtttacttaacgatctgcggggccttatcggctcggagcaggtggaactggagtttgac
taa
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