Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_08525
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Entry
KPNIH29_08525 CDS
T03465
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Pathway
kpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNIH29_08525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpv03019
]
KPNIH29_08525
Enzymes [BR:
kpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPNIH29_08525
Messenger RNA biogenesis [BR:
kpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPNIH29_08525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIX68589
UniProt:
A0A4S5Q0R9
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All DBs
Position
1738957..1740291
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AA seq
444 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRSGQPRSQNNAPRRQDG
EAPKARTQDGKPPRRRRPRKPAGE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctaggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgtgac
ctgatggccagcgcccagaccggcaccggtaaaacggcgggctttaccctgccgctgctg
cagcgcctgatccagaatgagccgcacgcaaagggccgtcgtccggtgcgcgcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagtaaa
tacctgaatattcgctcgctggtggtctttggcggggtgagcatcaacccgcagatgatg
aagctgcgcggcggcgtcgacatcctcgtcgccaccccgggccgtctgctggatcttgaa
catcagaacgccgtcagtcttgataaagtagaaatcctcgtgctggacgaagcggaccgc
atgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccggcgcgt
cgacagaatctgctgttctcggcgaccttctccgacgagatcaagggcctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgtaacaccgcgtccgagcagatc
acccagcacgtccattttgttgacaagaaccgcaagcgtgaactgctgtcgcagcttatc
ggcgaaggcaactggcagcaggtgctggtgtttacccgtaccaagcatggcgccaaccac
ctcgcggaacagctcaacaaagacggcatccgcagtgcggcgatccatggcaacaagagc
cagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggtcgcgcggcg
gccaccggcgaagccttatcgctggtgtgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgcgggcaa
ggtcagggacgcagcggacagccgcgcagccagaataatgccccgcgccgtcaggacggc
gaggcgccgaaagcgcgcactcaggacggcaaaccgccgcgccgccgtcgcccgcgtaaa
ccggctggcgaataa
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