Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_16585
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Entry
KPNIH29_16585 CDS
T03465
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpv03016
]
KPNIH29_16585
Enzymes [BR:
kpv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KPNIH29_16585
Transfer RNA biogenesis [BR:
kpv03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KPNIH29_16585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIX70073
LinkDB
All DBs
Position
complement(3319914..3321041)
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AA seq
375 aa
AA seq
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MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGQQVSLIDPLTI
NDWAPMRDLLLNQDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLPAAL
DECRVMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSTEKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAERLKRLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
gcggcctccgccgtcgctctggatacggaatttgtccgcacccgcacctattacccgcag
ctgggcctgctgcagctgttcgacggccagcaggtctctctgatcgatcccttgacgatt
aacgactgggcgccgatgcgcgacctgctgctcaaccaggatgtgactaaatacctgcat
gccggcagcgaagatttagaagtcttccttaatgcatttaacctgatgccgcagccgctg
attgacacccagatcctggcggccttctgcggccgcccaatgtcctggggcttcgcctcg
atggtggaagagtattccggggtagcgctggataaaagcgaatcccgcaccgactggctg
gcgcgcccgctgactgagcgtcagtgtgaatatgccgcggccgacgtctggtatctgctg
ccgatcgccagccagttaatggcggagaccgatcgcgctggctggctgccggcggcgctc
gacgagtgccgcgtgatgcagcagcgtcgtcaggaggtggtcgacccggccgaggcctgg
cgcgatatcggcaacgcctggcagctgcgtacccgccagctgggttgtctgcagctgttg
gcggagtggcgcctgcgcaaagcgcgcgagcgcgacctggcggtaaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctgggcgagctcgacagc
ctcgggttatccggtagcgaaattcgcttccacggcaaaacgctgattagcctggtcgaa
aaagcgcaggcgctgccggagtcggccctgccggcgccgctgcagaacctgatcgacatg
ccgggctaccgcaaagcctttaaagatattaaagcgctggtgcaggaagtgagcacggag
aagggcgtaagcgcggagctgctggcgtcgcgtcggcagatcaaccagctgctgaactgg
cactggcagctgaaaacgcaagccggtgaacctgagctgatttccggttggcgcggggag
ctgatggccgagcggctgaagaggctgttaaacgactatccgcgctag
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