Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_22875
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Entry
KPNIH29_22875 CDS
T03465
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Pathway
kpv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KPNIH29_22875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpv03021
]
KPNIH29_22875
Transcription machinery [BR:
kpv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KPNIH29_22875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_SUN2
Motif
Other DBs
NCBI-ProteinID:
AIX71220
UniProt:
A0A2W0WX81
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All DBs
Position
4598170..4600011
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AA seq
613 aa
AA seq
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MEQNPQSQLKLLVQRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DADDLMLAENTADEDAAEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIA
KRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAEEARLSDLITGFVDPNAEEDMAPTATH
VGSELSQEEMDDDEDEDEDEDADDNSDDDNSIDPELAREKFAELRTQYELTRDTIKAKGR
SHAAAQEEILKLSEVFKQFRLVPKQFDYLVNSMRSMMDRVRTQERIIMKLCVEQCKMPKK
NFITLFTGNETSETWFNAAVAMNKPWSEKLLEVKEDVQRGLQKLQQIEEETGLTIEQVKD
INRRMSIGEAKARRAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFE
YRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQMLQEMGREPTP
EELAERMLMPEDKIRKVLKIAKEPISMETPIGDDEDSHLGDFIEDTTLELPLDSATTESL
RAATHDVLAGLTAREAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRH
PSRSEVLRSFLDD
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagcttcttgtccaacgtggtaaggagcaaggc
tatctgacctatgccgaggtcaatgaccatctgccggaagatatcgtcgattccgatcag
atcgaagacatcatccaaatgatcaacgacatgggtattcaggtgatggaagaagcaccg
gatgccgatgatctgatgcttgccgaaaacaccgcggatgaagatgctgccgaagccgcc
gcgcaggtgctctccagcgtggaatccgaaatcgggcgcacgaccgacccggtgcgtatg
tacatgcgtgaaatgggtaccgtagagctgctgacccgtgaaggcgaaattgacatcgcc
aaacgcatcgaagacggcatcaatcaggtgcagtgctccgttgccgaatatccggaagcg
atcacctacctgcttgagcagtacgaccgcgttgaagcggaagaagcccgtctgtccgat
ctgatcaccggtttcgtcgatccgaacgccgaagaagatatggcgccaaccgccacccac
gttggctccgagctgtctcaggaagagatggatgacgacgaagacgaagacgaagatgaa
gacgccgacgacaacagcgatgacgacaacagcatcgacccagagctggcccgtgagaaa
ttcgccgagctgcgtacccagtacgagctgacgcgcgacaccatcaaagccaaaggtcgt
agccatgccgccgcccaggaagagatcctgaagctgtctgaagtcttcaagcagttccgc
ctggtgccgaagcagttcgattacctggtcaacagcatgcgcagcatgatggatcgcgtt
cgtactcaggaacgtatcatcatgaagctgtgcgttgagcagtgcaaaatgccgaagaaa
aacttcatcaccctgttcaccggcaacgaaaccagcgaaacctggttcaacgccgcggtg
gcaatgaacaagccgtggtctgagaagctgctggaagtgaaagaagatgtgcagcgcggc
ctgcagaagctgcagcagattgaagaagagaccggcctgaccatcgagcaggttaaagat
atcaaccgtcgcatgtccatcggcgaagcgaaagcccgtcgtgcgaagaaagagatggtt
gaagcgaacctgcgtctggttatctctatcgccaagaaatacaccaaccgcggtctgcag
ttcctcgacctgattcaggaaggcaacatcggtctgatgaaagcggtcgataagttcgaa
taccgtcgcggctacaagttctcgacctacgccacctggtggatccgtcaggccatcacc
cgctctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgattgagactatc
aacaagctcaaccgtatctcccgtcagatgctgcaggagatgggccgtgaaccgaccccg
gaagagctggctgagcgtatgctgatgccggaagacaaaatccgtaaagtgctgaagatc
gccaaagagcctatctccatggaaacgccgatcggcgacgatgaagattcgcatctgggg
gatttcatcgaggataccaccctcgagctgccgctggattctgcgaccaccgagagcctg
cgcgcggcaacgcatgacgtgctggccggcctcaccgctcgtgaagcgaaagtgctgcgt
atgcgtttcggtatcgacatgaacaccgaccacacgctggaagaagtgggtaaacagttc
gacgttacccgcgaacgtatccgtcagatcgaagcgaaggcgctgcgtaaactgcgccac
ccgagccgttctgaagtgctgcgtagcttccttgacgattaa
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