Klebsiella pneumoniae subsp. pneumoniae KPNIH29: KPNIH29_23385
Help
Entry
KPNIH29_23385 CDS
T03465
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kpv
Klebsiella pneumoniae subsp. pneumoniae KPNIH29
Pathway
kpv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNIH29_23385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpv03019
]
KPNIH29_23385
03009 Ribosome biogenesis [BR:
kpv03009
]
KPNIH29_23385
Enzymes [BR:
kpv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPNIH29_23385
Messenger RNA biogenesis [BR:
kpv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPNIH29_23385
Ribosome biogenesis [BR:
kpv03009
]
Prokaryotic type
rRNA helicases
KPNIH29_23385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIX71318
UniProt:
A0A2X3HRD3
LinkDB
All DBs
Position
complement(4694403..4696334)
Genome browser
AA seq
643 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLDGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLSKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPTAEGEELD
VETLAAALLKMAQGERSLIVPPDAPMRPRREFRDRDDRFDRRGDRNDRGPRGDREDRPKR
ERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASHSTIELPKGMP
GEVLQHFTRTRILNKPMNMQLLGDAQPRTERRGGGERREGGRGFGGERREGGRGFGGERR
EGGRGEGRRFSGERREGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcg
ctcaccgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctggacggccgcgacgttctgggtatggcccagaccggtagcggtaaaaccgcagcattc
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgagctggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtgaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gccctgcgtcagggtccgcagatcgtcgtcggtaccccgggtcgtctgctggaccacctg
aagcgcggcaccctggacctctccaaactgagcggcctggtactggatgaagcagatgaa
atgctgcgcatgggctttatcgaagacgtagaaaccattatggcgcagatcccggaaggg
catcagaccgcgctgttctccgccaccatgccggaagctatccgtcgcattacccgtcgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgacgactcgcccggatatc
agccagagctactggactgcctacggcatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagactttgatgcggcgattatcttcgtccgtaccaaaaacgcgaccctggaa
gtagctgaagcgctggagcgtaatggctacaacagcgcggcgctgaacggcgacatgaac
caggcgctgcgtgagcagactctggaacgcctgaaagatggtcgtctggatatcctgatt
gcgactgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggtgaactac
gacatcccaatggattctgaatcctacgttcaccgtatcggccgtactggtcgtgccggt
cgtgctggccgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgtaacatc
gaacgcactatgaagctgaccattcctgaagtggaactgcctaacgcggagctgctgagc
aagcgtcgtctggaaaaattcgccgcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcactgctggcgaaaatccagccgacggcggaaggtgaagagctggac
gtggaaacgctggctgctgcgctgctgaagatggctcagggcgaacgttcgctgatcgtt
ccgccggacgcgccgatgcgtccacgtcgtgaattccgcgatcgtgacgatcgtttcgac
cgtcgtggcgaccgtaatgatcgcggcccgcgcggcgatcgcgaagatcgtccgaagcgt
gagcgtcgtgacgtgggtgacatggagctgtatcgcattgaagtgggtcgcgatgacggc
gttgaagtgcgtcatatcgttggcgcgatcgccaatgaaggcgatatcagcagccgttac
atcggtaacatcaagctgttcgcttctcactccaccattgagctgccgaaagggatgccg
ggcgaagtgctgcagcactttactcgtacccgtatcctgaacaagccgatgaacatgcag
ctgctgggcgatgcgcagccgcgcaccgaacgtcgtggcggcggtgagcgtcgcgaaggc
ggccgtggctttggcggcgagcgtcgtgaaggcggccgtggcttcggtggcgaacgtcgt
gaaggcggtcgtggtgaaggacgtcgtttcagcggcgaacgtcgtgaaggccgtgcgccg
cgtcgtgacgatgcatccgcgccgcgccgcgatgactcagccggtcgccgtcgcttcggt
ggcgatgcgtaa
DBGET
integrated database retrieval system
