Klebsiella pneumoniae subsp. pneumoniae KPNIH30: KPNIH30_22095
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Entry
KPNIH30_22095 CDS
T03466
Name
(GenBank) ssDNA exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kpw
Klebsiella pneumoniae subsp. pneumoniae KPNIH30
Pathway
kpw03410
Base excision repair
kpw03430
Mismatch repair
kpw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KPNIH30_22095
03430 Mismatch repair
KPNIH30_22095
03440 Homologous recombination
KPNIH30_22095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpw03400
]
KPNIH30_22095
DNA repair and recombination proteins [BR:
kpw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KPNIH30_22095
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KPNIH30_22095
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KPNIH30_22095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIX80815
UniProt:
A0A3N0KW28
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Position
complement(4395628..4397361)
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AA seq
577 aa
AA seq
DB search
MKQQIQLRRREAIDGVELPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
VEMLHDAFQKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIPAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSADTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVDGGPLLDGIAFNVDTS
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaactacgccgccgcgaggcgattgacggcgtcgaactccccgcc
gacctgccgccgctgctgcagcggctatatgccagccgcggggtgcgcagcgcgcaggag
ctggagcgcagcgtcaaaggcatgctcccctggacgcagctcaccggcgttgaaaaagcg
gtcgagatgctgcatgacgcgttccagaaagggttgcacatcgtggtggtcggtgatttt
gacgccgacggcgccaccagcaccgcgctcagcgtgttggccctgcgcgcgctgggttac
ggcaacgtctcctatctggtgccgaaccgctttgaagacggctacggtttaagcccggaa
gtggtcgatcaggcccatgctcgcggcgcgcagatgatcatgaccgtcgacaacgggatc
tcgtcccatgccggcgtcgatcatgcccatgcgctggggatcccggtgctggtgaccgat
caccatctgccgggcgagacgctgccggcggcggaagctatcgttaatcccaacctgcgc
gattgcgacttcccgtcaaaatcactggccggggtgggggtggcgttttatctgatgctg
gcgctgcgcacttttctgcgcgataaaggctggttcgacgctcgcggcatccccgcgccg
aaccttgccgagctgctggatctggtggcgctaggcaccgtcgcggacgtcgtgccgctg
gatgctaataaccgtatcctcacctggcaggggttaagccgcattcgcgccggcaaatgt
cggcccggtattaaggcgctgctggaaattgccaaccgcgatccgcaaaagctggcggcc
agcgacctcggtttcgccctcgggccgcgcctgaacgcggcgggacggctggacgacatg
tcggtcggcgtcgcgctgctgctgtgcgacaacatcggcgaagcgcgggtgctggccaac
gagctcgatgcgcttaatcagacgcgcaaagagattgagcaggggatgcaggcggaagcg
ctaacgctctgtcagcagctggagcgcagcgccgataccctgcccggcgggctggcgatg
taccatccgcaatggcatcaaggggtagtcggcattctcgcctcgcggattaaggagcgc
ttccatcgcccggttatcgcttttgcgcctaccggcgacggcacgctgaaaggctccggc
cgttccattcaggggttgcatatgcgcgatgcgctggagcgccttgatacgctttatccc
gggctaatcctgaagttcggcggccacgcgatggcggcgggcttatcgctggaggaggcg
cgttttgaagagtttcaacagcgcttcggcgagctggtgaccgaatggctggatcctgcg
ctgttgcagggcgaggtggtttccgatggcccgctggcggcggcggagatgagcatggaa
gtggcgcagatgctgcgcgacgccgggccgtgggggcagatgttcccggaaccgctgttt
gacggtcgttttcgcctgctgcagcagcggctggtgggcgagcgtcacctgaaggtgatg
gtcgaaccggttgacggcgggccgctgctggacggtatcgccttcaacgtggatacttcc
atctggccggataacggcgtgcgtgaagtccagttagcctacaagctcgacatcaacgag
ttccgcggcaaccgtagcctgcagctgatcatcgatcacctctggccaaattga
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