Klebsiella pneumoniae PMK1: PMK1_00608
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Entry
PMK1_00608 CDS
T03419
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kpx
Klebsiella pneumoniae PMK1
Brite
KEGG Orthology (KO) [BR:
kpx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kpx03009
]
PMK1_00608 (rlmD)
Enzymes [BR:
kpx01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
PMK1_00608 (rlmD)
Ribosome biogenesis [BR:
kpx03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
PMK1_00608 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
RrnaAD
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Cons_hypoth95
FtsJ
Methyltransf_4
Methyltransf_23
Methyltr_RsmB-F
Methyltransf_12
Methyltransf_15
Ubie_methyltran
PrmA
Methyltransf_32
Methyltrans_SAM
CMAS
TPMT
Motif
Other DBs
NCBI-ProteinID:
AIT00109
UniProt:
A0A4S7W5T2
LinkDB
All DBs
Position
complement(665254..666558)
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AA seq
434 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFVSGVLPHEQAEVVLVEDKKQ
YARAEVKRRLTDSPQRQAPRCPHFGVCGGCQQQHASIPLQQQSKRAALGRLMKREVDDVI
AGAPWGYRRRARLSLNYQPKTQQLQMGFRQANAKAIVDVVQCPVLVPQLEALLPAVRECL
SALSALRHLGHVELVQADNGPLMVLRHTAALPATDREKLERFSQTHGLSLYLAPQSEILE
HIHGEAPWYTSDGLRLVFSPRDFIQVNDGVNQQMVRTALEWLDLRPEDRVLDLFCGMGNF
TLPLATRAAHVVGVEGVPALVEKGRENAARNGLSNVTFFHENLEEDVTRQAWAKHGFDKV
LLDPARAGAPGVMPHIIKLAPRRVVYVSCNPATLARDSETLLQAGYQIQRLAMLDMFPHT
GHLESMVLFERRLT
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgtgtgacgacgcgccagatcataaccgttaca
gtcaacgacctcgatccctttggtcagggtgttgcccgccatcaggggaaggcgttgttc
gtgagcggcgtgctgccccacgagcaggccgaggtggtgctggtggaagataaaaaacag
tacgcccgcgccgaggtgaaacgccgactgaccgacagcccgcagcgccaggcgccgcgc
tgcccccattttggcgtctgcggcggatgccaacaacaacatgccagcattccgcttcag
cagcaaagtaaacgcgccgcgctggggcgactgatgaagcgcgaggtagatgacgtcatc
gccggcgcgccgtggggctaccgccgtcgcgcacgcttgagcttgaattatcagccgaag
acccaacaattgcagatgggttttcgccaggccaacgccaaagcgatcgtcgatgtggtg
cagtgccctgttttggtgccccaacttgaggcattgctgcccgctgtgcgcgagtgctta
agcgcgctgagcgcattacgccatctcggccacgtcgagctggtgcaggcggacaatggc
ccgctgatggtgctgcgccataccgcagccctgccggcgacagacagggaaaaactggaa
cgcttttcgcaaactcacggtctttccctgtacctcgcgccacaaagcgagatactggag
catattcatggcgaagcgccatggtatacctcagacggactacgcttagtgttcagcccg
cgggattttatccaggtcaacgacggcgtaaatcagcagatggtgcgtaccgcactggag
tggctggatctgcggccagaggaccgggtgctggatctgttctgcgggatgggcaacttt
accctgccgctggcgacacgcgccgcccatgtggtgggcgtggaaggggtgccggcgctg
gtggagaaggggcgggaaaacgccgcccgcaatggtttatcaaatgtcactttcttccat
gaaaatctggaagaagacgtcacccgtcaggcctgggcgaagcacggctttgataaagtg
ctgctggacccggcccgcgccggcgcgccgggtgtgatgccgcatataataaaactggca
ccgcggcgggtggtgtatgtttcctgcaacccggcgacgctggcgcgagacagcgaaacc
ctgttgcaggctggatatcagattcaacgcctggcgatgctggatatgttcccgcatacc
ggccatctggaatcaatggtgttgtttgagcgcaggcttacataa
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