Klebsiella pneumoniae PMK1: PMK1_03162
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Entry
PMK1_03162 CDS
T03419
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpx
Klebsiella pneumoniae PMK1
Pathway
kpx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PMK1_03162 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpx03019
]
PMK1_03162 (rhlE)
Enzymes [BR:
kpx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PMK1_03162 (rhlE)
Messenger RNA biogenesis [BR:
kpx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PMK1_03162 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIT02607
UniProt:
A0A0C7KL25
LinkDB
All DBs
Position
3412666..3414021
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLILNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQNN
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgtgac
ctgatggctagcgcccagaccggcaccggtaaaacggcgggctttaccctgccgctgctg
cagcgcctgatcctgaatgagccgcacgcaaagggccgtcgtccggtgcgcgcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagtaaa
tacctgaatattcgctcgctggtggtcttcggcggcgtgagtatcaacccgcagatgatg
aagctgcgcggcggcgtcgacatcctcgtcgccaccccgggccgtctgctggacctcgaa
catcagaacgccgtcagtcttgataaagttgaaatcctcgtgctggacgaagcggaccgt
atgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccggcgcgt
cgacagaacctgctgttctcggcgaccttctccgacgagatcaagggcctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgtaacaccgcgtccgagcagatc
acccagcacgtccatttcgttgacaagaaccgcaagcgtgaactgctgtcgcagcttatc
ggcgaaggcaactggcagcaggtgctggtgtttacccgtaccaagcatggcgccaaccac
ctcgcggaacagctcaacaaagacggcatccgcagcgcggcgatccatggcaacaagagc
cagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggtcgcgcggcg
gccaccggcgaagccttatcattggtgtgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgtgggcaa
ggtcagggacgcggcggccagggtcagggacgcagcggacagccgcgcagccagaataat
gccccgcgccgtcaggacggcgaggcgccgaaagcgcgcactcaggacggcaaaccgccg
cgccgccgtcgcccgcgtaaaccggctggcgaataa
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