Klebsiella pneumoniae subsp. pneumoniae KPNIH31: KPNIH31_16810
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Entry
KPNIH31_16810 CDS
T03467
Symbol
sbcB
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
kpy
Klebsiella pneumoniae subsp. pneumoniae KPNIH31
Pathway
kpy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kpy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KPNIH31_16810 (sbcB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kpy03400
]
KPNIH31_16810 (sbcB)
Enzymes [BR:
kpy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
KPNIH31_16810 (sbcB)
DNA repair and recombination proteins [BR:
kpy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
KPNIH31_16810 (sbcB)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KPNIH31_16810 (sbcB)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KPNIH31_16810 (sbcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AIX85195
LinkDB
All DBs
Position
3375121..3376545
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AA seq
474 aa
AA seq
DB search
MQDSVNQPGFLFHDYETFGTSPSLDRPAQFAAIRTDAELNVLGEPEVFYCKPADDYLPQP
QAVMITGITPQEALAKGDNEATFARRIHDLFTVPQTCIVGYNNVRFDDEVTRNIFYRNFY
DPYAWSWQHDNSRWDLLDVMRACYALRPEGIAWPENDEGLPSFRLEHLTVANGIEHQNAH
DAMADVYATIAMAKLVKTRQPRLFDYLYSHRNKRKLATLIDVPQMKPLVHVSGMFGAARG
NTSLVAPLAWHPENRNAVIMVDLAGDMAPLLELDADALRERLYTPRAELGDLPAAPIKLV
HLNKCPVLAQANTLRPQDADRLGISIQRCLENAQLLRANPQVREKVVAVYAEAEPFVPSE
NVDAQLYNGFFSDADRAAMKIVLETEPRNLPALDITFADKRIERLLFNYRARNFPGTLDE
HEQQRWLEHRRQVFTPEFLQAYADELQMLYQQYADDKEKLAQLKALWQYAQDIV
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatagcgtcaaccagcccggatttttattccacgattatgaaaccttcggcacc
agcccttccctcgaccggccggcgcagttcgccgccatccgcaccgacgcggagctgaat
gtgctcggcgagcccgaagtgttttactgcaaacccgctgacgattacctgccgcagccg
caggcggtgatgatcaccgggatcacgccgcaggaagcgctggccaaaggggataatgag
gccacatttgcccgccgcatccacgatctgttcacggtgccgcaaacctgtatcgtcggc
tataacaacgtgcgctttgatgacgaagtgacgcggaatatcttctatcgcaacttctat
gacccttatgcctggagctggcagcacgataactcgcgctgggatctgctcgacgtgatg
cgcgcctgctatgccctgcgcccggaagggatcgcctggccagagaatgacgaagggttg
ccgagcttccggcttgaacatctgaccgtcgccaacggtattgaacaccagaacgcccat
gacgcgatggccgacgtatacgccaccatcgccatggcgaaactggtgaaaacccggcag
ccgcggctgtttgattatctctacagccaccgcaataagcgcaagctggcgacgcttatc
gacgtgccgcagatgaagcccctggtgcatgtctccggcatgtttggcgccgcgcgcggc
aacaccagcctggtggcgcctctggcctggcatccggaaaaccgcaatgcggtgattatg
gtcgatctggcgggcgatatggcgccgctgctggaactggatgccgatgccctgcgcgag
cggctttacaccccgcgcgccgagcttggcgatctgccggcggcgccgatcaagctggtg
catttaaataaatgtccggtgctggcccaggccaataccctgcgcccgcaggatgccgac
cggctggggatctccattcagcgctgtctggagaacgcccagctgctgcgggcgaatccg
caggtgcgggagaaagtggtggcggtctatgccgaagccgagccgttcgtgccgtccgaa
aacgtcgacgcccagctttacaatgggttctttagcgatgccgaccgcgcggcgatgaaa
atcgtactggaaaccgaaccgcgcaatctgccggcgctggatattaccttcgccgataag
cgtatcgaacgcctgctgtttaactaccgggcgcgcaacttccccggcacgctcgatgaa
catgagcagcagcgctggttagagcaccgtcgtcaggtgtttacgccagagtttttgcaa
gcctatgccgatgagctgcagatgctgtatcaacagtatgcggatgataaagagaagctg
gcgcagctgaaggcgctgtggcagtacgcacaggatattgtctga
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