Klebsiella pneumoniae subsp. pneumoniae KPNIH27: KPNIH27_00715
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Entry
KPNIH27_00715 CDS
T03370
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kpz
Klebsiella pneumoniae subsp. pneumoniae KPNIH27
Pathway
kpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNIH27_00715 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kpz03021
]
KPNIH27_00715 (rho)
03019 Messenger RNA biogenesis [BR:
kpz03019
]
KPNIH27_00715 (rho)
Transcription machinery [BR:
kpz03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KPNIH27_00715 (rho)
Messenger RNA biogenesis [BR:
kpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KPNIH27_00715 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_22
AAA_25
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AIA39898
LinkDB
All DBs
Position
150471..151730
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaagatatctttggcgacggcgtactggagatactgcaggat
ggatttggattcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgctcgc
gtactggatctggcctccccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaagccggtaaaaccatgctgctgcagaacatcgcgcagagcatcgcatacaaccacccg
gactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggcatcccgtcacgtg
caggttgccgagatggttattgagaaagcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactccattacccgtctggcgcgtgcctacaacaccgtggttccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgtttc
tttggtgcggcacgtaacgtcgaggagggcggtagcctgaccatcatcgccacggcgctg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatggaattcctcatc
aataagctggcaatgaccaagacgaatgatgacttcttcgatatgatgaagcgctcgtaa
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