Klebsiella pneumoniae subsp. pneumoniae KPNIH27: KPNIH27_07825
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Entry
KPNIH27_07825 CDS
T03370
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kpz
Klebsiella pneumoniae subsp. pneumoniae KPNIH27
Pathway
kpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KPNIH27_07825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpz03019
]
KPNIH27_07825
Enzymes [BR:
kpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KPNIH27_07825
Messenger RNA biogenesis [BR:
kpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KPNIH27_07825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AIA41226
LinkDB
All DBs
Position
1644854..1646209
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AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQNN
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgtgac
ctgatggctagcgcccagaccggcaccggtaaaacggcgggctttaccctgccgctgctg
cagcgcctgatccagaatgagccgcacgcaaagggccgtcgtccggtgcgcgcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagtaaa
tacctgaatattcgctcgctggtggtcttcggcggcgtgagtatcaacccgcagatgatg
aagctgcgcggcggcgtcgacatcctcgtcgccaccccgggccgtctgctggacctcgaa
catcagaacgccgtcagtcttgataaagttgaaatcctcgtgctggacgaagcggaccgt
atgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccggcgcgt
cgacagaacctgctgttctcggcgaccttctccgacgagatcaagggcctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgtaacaccgcgtccgagcagatc
acccagcacgtccattttgttgacaagaaccgcaagcgtgaactgctgtcgcagcttatc
ggcgaaggtaactggcagcaggtgctggtgtttacccgtaccaagcatggcgccaaccac
ctcgcggaacagctcaacaaagacggcatccgcagcgcggcgatccatggcaacaagagc
cagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggtcgcgcggcg
gccaccggcgaagccttatcgctggtgtgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgcgggcaa
ggtcagggacgcggcggccagggtcagggacgcagcggacagccgcgcagccagaataat
gccccgcgccgtcaggacggcgaggcgccgaaagcgcgcactcaggacggcaaaccgccg
cgccgccgtcgcccgcgtaaaccggctggcgaataa
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