Klebsiella pneumoniae subsp. pneumoniae KPNIH27: KPNIH27_11625
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Entry
KPNIH27_11625 CDS
T03370
Name
(GenBank) ATP-dependent helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kpz
Klebsiella pneumoniae subsp. pneumoniae KPNIH27
Brite
KEGG Orthology (KO) [BR:
kpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kpz03019
]
KPNIH27_11625
Enzymes [BR:
kpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KPNIH27_11625
Messenger RNA biogenesis [BR:
kpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KPNIH27_11625
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
WHD_HA2
AAA_22
nSTAND3
T2SSE
NACHT
nSTAND_NTPase5
DUF6145
ResIII
PhoH
SLFN-g3_helicase
AAA_16
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AIA41947
LinkDB
All DBs
Position
2409538..2413440
Genome browser
AA seq
1300 aa
AA seq
DB search
MTEQQKITFPQLYQQLDGLMLRDKTRFARRLHGVKKVKNPESQQAILQEMALEISQAAGK
VLLREAARPAITYPENLPVSQKKQEILEAVRDHQVVIVAGETGSGKTTQLPKICMELGRG
LKGLIGHTQPRRLAARTVANRIAEELQSEPGGCIGYKVRFSDHVSENTMVKLMTDGILLA
EIQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRRPDLKIIITSATIDPERFSKH
FNNAPIIEVSGRTYPVEVRYRPIVEEADDTERDQLQAIFDAVDELGREGPGDILIFMSGE
REIRDTADALNKLDLRHTEVLPLYARLSNSEQNRVFQPHSGRRIVLATNVAETSLTVPGI
KYVIDPGTARISRYSYRTKVQRLPIEPVSQASANQRKGRCGRVSEGICIRLYSEDDFLSR
PEFTDPEILRTNLASVILQMTALGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAITTDAQ
ATAYKLTPLGRQLSQLPVDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQA
SDEKHRRFHDKESDFLAFVNLWNYLGEQQKALSSNQFRRQCRVDFLNYLRVREWQDIYTQ
LRQVVKELGLPINSEPAEYREIHTALLTGLLSHIGMKDADKQEYTGARNARFSIFPGSGL
FKKPPKWTMVAELVETSRLWGRIAARIEPEWVEPVAQHLIKRSYSEPHWERAQGAVMATE
KVTVYGLPIVAARKVNYSQIDPALCRELFIRHALVEGDWQTRHAFFRENLKLRAEIEELE
HKSRRRDILVDDETMFEFYDQRISHDVISARHFDSWWKRASRETPDLLNFEKSMLIKEGA
EQVSKLDYPNFWHQGNLKLRLSYQFEPGADADGVTVHIPLPLLNQVEEAGFEWQIPGLRR
ELIIALIKSLPKPVRRNFVPAPNYAEAFLGRAAPLELPLLDSLERELRKMTGVTIDREAW
QWDQVPDHLKITFRVVDDKNKKLQEGRSLQALKDALKGKVQETLSAVADDGIEQSGLHIW
SFGTLAESYEQKRGNYKVKAWPALVDERDSVAIKLFDNPQEQQQAMWRGLRRLLLLNIPS
PIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCISCGVDKLIDEAGGPVWTEEGFSQLHDK
VRAELNDTVVEIAKQVEQILTAVFNINKRLKGRVDMTMALGLSDIKAQMAGLVYRGFVTG
NGFRRLGDTLRYLQAIEKRLEKMAIDPHRDRAQMLKVESVQQAWQQWLNKLPPNRREDDD
VREIRWMIEELRVSFFAQQLGTPYPISDKRVLQAMEQITP
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgacagaacaacaaaaaatcaccttcccccagctttatcaacagctcgacggcctgatg
ctgcgcgacaaaacgcgctttgcccgccgtctacacggcgtgaagaaggttaaaaatcct
gaatcgcaacaggccattctgcaggagatggcgctggagataagccaggcagccggtaaa
gtcctgctgcgcgaagcggcgcgtccggccatcacctatccggaaaacctgccggttagc
cagaaaaaacaagagattctcgaggcggtgcgcgaccaccaggtggtgatcgtcgccggg
gagaccggttcgggtaaaaccacccagctgccaaaaatctgcatggagctggggcgcggg
ctgaaaggactcatcggccatacccagccgcgtcgcctggcggcgcggaccgtcgccaat
cgtattgccgaagagctgcagagcgagccgggcggctgcatcggctataaagtccgcttc
agcgaccacgtcagcgaaaacaccatggttaagctgatgaccgacggtatccttctggcg
gagatccagcaggatcgtctattgatgcagtacgacaccatcattatcgatgaggcgcac
gagcgcagcctgaatattgactttctgctcggctatctgaaagagctcctgccgcgccgc
ccggacctgaaaatcatcattacctcggcgaccatcgacccggaacgtttctcaaagcat
ttcaataatgcgccgattatcgaagtctccgggcggacttacccggtggaagtgcgctat
cggccgatagtggaagaggcggacgataccgagcgcgatcagttacaggcgatctttgat
gcggttgacgaactggggcgcgaagggcccggcgatattctgatctttatgagcggtgag
cgggaaattcgcgataccgccgatgcgctgaataagctggatctgcgccataccgaagtg
ctgccgctgtacgcccgcctgtccaacagcgagcagaaccgcgtcttccagccgcacagc
gggcggcgcatcgtgctggcgaccaacgtggcggaaacctcgctgaccgtgccgggcatt
aagtacgttatcgatcccggtactgcgcgtatcagccgttacagctaccgcaccaaggtg
cagcgcctgccgatcgagccggtttcccaggcgtccgccaaccagcgtaagggccgctgc
ggccgcgtttcggaagggatctgtattcgtctttattcagaagacgatttcctgtcgcgc
ccggaatttaccgacccggagattctgcgcaccaacctggcgtcggtcatcctgcagatg
accgccctgggcttaggcgatatcgccgccttcccgtttgtcgaagcgccggataagcgc
aatatccaggacggcgtacgcctgctggaagagctgggcgccatcaccaccgatgcgcag
gcaacggcttataagctaaccccgctgggccgccagctcagccagctaccggtggatccg
cgtctggcgcgcatggtgctggaggcgcagaagcacggctgcgtgcgggaagcgatgatc
atcacctccgcgctgtcgatccaggacccgcgcgagcggccgatggacaaacagcaggcc
tctgacgaaaaacatcgccgcttccacgataaagagtccgatttcctcgccttcgtcaat
ctgtggaactacctcggcgagcagcagaaggctctgtcgtcgaatcagttccgccgccag
tgccgggtcgattttcttaactatctgcgcgtgcgcgagtggcaggacatctacacccag
ctgcgccaggtggtgaaagagcttggcctgccgatcaacagtgagccggcggaatatcgc
gagatccatactgcgctgctgaccggtctgctgtcgcacatcggcatgaaggatgccgat
aaacaggagtataccggcgcccgtaatgcgcggttctctatcttccccggctccggtcta
ttcaagaagccgccgaagtggacgatggttgcggagctggtcgagaccagccgcctgtgg
gggcgtattgccgcccgcattgagccggagtgggtggagccggtagcgcagcacctgatc
aagcgctcatacagtgagccgcactgggagcgggcgcagggcgcggtgatggcgacggaa
aaggttaccgtttacggcctgccgatcgtcgccgcgcgtaaggtcaactacagccagatc
gacccggcgctgtgtcgtgagctatttatccgccacgcgctggtagagggcgactggcag
acgcggcacgccttcttccgcgaaaacctgaagctgcgggcggaaatcgaagagctggag
cataagtcgcgccgtcgcgacatcctggtggatgacgagacgatgttcgagttttacgac
cagcgcatcagccacgacgtcatctccgcccgccacttcgatagctggtggaagcgggcc
agccgtgaaacgccagacttgctcaattttgaaaagagcatgctgattaaagagggggcg
gagcaggtcagtaaactggactacccgaatttctggcatcagggcaacctcaagctgcgg
cttagctaccagtttgaacctggcgccgatgccgatggcgtgacggtgcatattccgctg
ccgctgctcaaccaggtagaggaagccgggtttgaatggcagatccctggcctgcgtcgc
gagctgattatcgcgctgataaaatcgctgccgaagccggtacggcgcaatttcgtcccg
gctcccaactatgcggaagcgtttcttggccgggcggcgccgcttgagctgccgctgctc
gattcgctggagcgcgagctgcgtaagatgaccggcgtgaccatcgaccgcgaagcctgg
cagtgggatcaggtgcccgatcacctgaaaatcaccttccgggtggtggatgataaaaac
aagaagctgcaggaagggcgctcgctgcaggcgttgaaagacgccctgaagggcaaagtg
caggagacgctgtcggcggtcgctgatgacggtattgagcaaagcgggctgcatatctgg
agctttggcaccctggcagaaagttacgaacagaagcgcggtaactataaggtgaaagcc
tggccggcgctggtggacgagcgcgacagcgtggccatcaaactgtttgataatccacag
gaacagcagcaggccatgtggcgcggtctgcgtcgcctgctgctgctcaacatcccgtcg
ccgattaagtatctgcacgagaaactaccgaataaagccaagcttgggctctactttaac
ccgtacggcaaagtgctggatctgattgacgattgcatctcctgcggcgttgataagctt
attgacgaggcgggcggtccggtgtggacggaagagggctttagtcagctgcacgataaa
gtgcgagccgagctcaacgacacggtggtggagatcgctaaacaggtcgagcagatcctc
accgcggtgttcaatatcaacaaacggctgaaaggccgggtggatatgaccatggcgctg
gggctgtcggatatcaaagcgcagatggcgggtctggtgtatcgcggctttgtcaccggc
aacggtttccgccgtcttggcgatacgctgcgctatctgcaggcgattgaaaagcgtctg
gagaagatggctatcgatccgcaccgcgatcgggcgcagatgcttaaggtggagagcgtg
cagcaggcgtggcagcagtggctgaataagctaccgccgaaccgccgtgaggacgacgat
gtccgggagatccgctggatgatcgaggagctgcgggtcagcttcttcgcccagcagctg
ggcaccccgtatcctatctcggacaagcgagtgttgcaggcgatggagcaaattacccca
tag
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integrated database retrieval system
