Klebsiella pneumoniae subsp. pneumoniae KPNIH27: KPNIH27_16115
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Entry
KPNIH27_16115 CDS
T03370
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kpz
Klebsiella pneumoniae subsp. pneumoniae KPNIH27
Brite
KEGG Orthology (KO) [BR:
kpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kpz03016
]
KPNIH27_16115
Enzymes [BR:
kpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KPNIH27_16115
Transfer RNA biogenesis [BR:
kpz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KPNIH27_16115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AIA42786
LinkDB
All DBs
Position
complement(3306976..3308103)
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AA seq
375 aa
AA seq
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MNYQMITTDDGLRAVCEAASTASAVALDTEFVRTRTYYPQLGLLQLFDGQQVSLIDPLTI
NDWAPMRDLLLNQDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLPAAL
DECRVMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKVFKDIKALVQEVSTEKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAERLKRLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtctgcgaagcggcaagc
acggcctccgccgtcgctctggatacggaatttgtccgcacccgcacctattacccgcag
ctgggcctgctgcagctgttcgacggccagcaggtctctctgatcgatcccttgacgatt
aacgactgggcgccgatgcgcgacctgctgctcaaccaggatgtgactaaatacctgcat
gccggcagcgaagatttagaagtcttccttaatgcatttaacctgatgccgcagccgctg
attgacacccagatcctggcggccttctgcggccgcccaatgtcctggggcttcgcctcg
atggtggaagagtattccggggtagcgctggataaaagcgaatcccgcaccgactggctg
gcgcgcccgctgactgagcgtcagtgtgaatatgccgcggccgacgtctggtatctgctg
ccgatcgccagccagttaatggcggagaccgatcgcgctggctggctgccggcggcgctc
gacgagtgccgcgtgatgcagcagcgtcgtcaggaggtggtcgacccggccgaggcctgg
cgcgatatcggcaacgcctggcagctgcgtacccgccagctgggttgtctgcagctgttg
gcggagtggcgcctgcgcaaagcgcgcgagcgcgacctggcggtaaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctgggcgagctcgacagc
ctcgggttgtccggtagcgaaattcgcttccacggcaaaacgctgattagcctggtcgaa
aaagcgcaggcgctgccggagtcggccctgccagcgccgctgcagaacctgatcgacatg
ccgggctaccgcaaagtctttaaagatattaaagcgctggtgcaggaagtgagcacggag
aagggcgtaagcgcggagctgctggcgtcccgtcggcagatcaaccagctgctgaactgg
cactggcagctgaaaacgcaagccggtgaacctgagctgatttccggttggcgcggggag
ctgatggccgagcggctgaagaggctgttaaacgactatccgcgctag
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