Kribbella qitaiheensis: F1D05_02325
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Entry
F1D05_02325 CDS
T06749
Name
(GenBank) AAA family ATPase
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kqi
Kribbella qitaiheensis
Pathway
kqi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
F1D05_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqi03400
]
F1D05_02325
Enzymes [BR:
kqi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
F1D05_02325
DNA repair and recombination proteins [BR:
kqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F1D05_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
AAA_30
PhoH
Motif
Other DBs
NCBI-ProteinID:
QNE16952
UniProt:
A0A7G6WSI7
LinkDB
All DBs
Position
complement(510736..514032)
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AA seq
1098 aa
AA seq
DB search
MEAFDLLGELPTGTIVLEASAGTGKTYALAGLVTRFVAEGRARLDEMLLITFGRAASQEL
RERVRSQLLQAELALADPDRWRDDQGLLGHLVQGSADDIAVRHLRLRDALANFDAATIAT
THQFCQLVLRSLGVAGDTDAGVTLVDDLRALVTEVVDDLYLNLFGGSADKPPITRGTALE
IALKAVANPHTRLVPEKYAEASPEGVRVEFAQAVRAELERRKRRLGILGYDDLLTRLAAA
LEEPDAPARLRMQRRWSVVMVDEFQDTDPVQWKVIDAAFNGHSTLVLIGDPKQAIYAFRG
GDIATYLAAAATAGQRRTLGTNWRSDQPLVDCLQVVLGGARLGHQDIVVHPVAAHHQGSR
LTGAPSDAPFRLRVARREQFGSSRRKSIPMDDLRDHIARDLAGDISRLLAADATYAGQPF
RAGDIAVIVETHKDARVCREELARAGIPAVYSGDLDIFASQAAQDWLRLLEAFEQPHRSG
LVRAAATTMFFGETATSLYAGGEELTDRTGQTLRAWADRLRTSGVAAVFEAAQVNGMTER
VLAWRNGERDMTDLAHLAELLHETAHREGFGLPALLDWLREECAGRGRTTERTRRLDSDA
AAVQIMTVWVSKGLQYPVVYLPFAFNRHVVEDTELILFHEDGERCLDLGGKGHRGHKANQ
RQWRAEEAGDDIRLTYVALTRAQSQVVAWWAPSWDEVNGGISRLLRTRKQGEPVVPDTLE
RAASDDDVLVWLRRWQQAGGPVIEESLIAEHVEPVPEELPGGLAVGTFSREVDIAWRRTS
YSGLIRAADQQASGVVSEQEESQLEDESVDPVPAPGAAQTDALPSPMDGLPAGATFGSLV
HAVLEEADPQSPDLHAELAGRVREQLRFWRVDVTPDALATAMLPLHSTPLGPLVPGLTLG
DLGRADRLRELDFEIPLAGGDHAVATDVQLAQLAPLLRTHLSADDPLLAYADRLEQPLLG
RQSLRGYLSGSIDVVLRVPHGGSHRFVVVDYKTNRLGDPEEPATSAEYGQDQLGAAMLHS
DYPLQAMLYSVVLHRYLRWRLPDYDPEVHLGGVIYLYLRGMCGPDTPLVDGHPAGVFSWP
MPAALVLALSDLLDGRAT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaggccttcgacctgctcggtgaactgccgacgggaaccatcgtgctggaggcgagt
gccggcacgggcaagacctatgccctggccgggctggtcacccgcttcgtggcggagggc
cgggccaggctcgacgagatgctgctgatcaccttcggccgcgcggccagccaggaactc
cgcgaacgcgtgcgctcacaactgttgcaagccgagctcgcactggccgatcccgaccgt
tggcgtgacgaccagggtctactcggccacctcgtccagggcagcgccgacgacatcgcc
gtacggcacttgcgccttcgcgacgccttggccaacttcgatgcggccaccatcgccacg
acgcaccagttctgccagctcgtactgcgctcgctcggcgtcgcaggtgacaccgacgca
ggggtcaccctggtcgacgacctgagggcgctcgtcaccgaggtggtcgacgacctgtat
ctcaatctcttcgggggttcggcggacaagccgcccatcacgcgcggcaccgctctcgag
atcgccctcaaagcggtcgccaacccgcacacccggctggtacccgagaagtacgccgag
gcctcacccgagggcgtccgcgtcgagttcgcgcaagccgtccgggccgagctggagcgg
cgcaaacgccgtctcggcattctcggctacgacgacctgctcacccgtctcgccgctgcc
ctggaagaacccgacgccccggcccgactgcggatgcagcgtcgctggtcggtggtgatg
gtcgacgagttccaggacaccgatccggtgcagtggaaggtgatcgacgccgcgttcaac
ggtcacagcaccctggtgctgatcggcgaccccaaacaggccatctatgccttccgcggt
ggtgacatcgcgacgtacctcgcggccgccgcgaccgcgggccaaaggcgcaccctcggt
accaactggcgcagcgaccagccgctggtcgactgcctgcaggtcgtgctgggcggcgcc
cgacttggccatcaggacatcgtcgttcacccggtcgccgcccaccaccagggcagccgg
ctcaccggagcgccgtcggacgcgcctttccggctccgggtcgcgcgacgggagcagttc
ggctcgagcaggcgcaagagcatcccgatggatgatcttcgcgaccacatcgctcgcgat
ctggccggcgacatcagccgtctactggccgccgacgcgacgtacgccggtcaaccgttc
cgcgccggtgacatcgcggtgatcgtcgagacgcacaaggacgcgcgggtgtgccgggag
gaactcgcccgggcgggcatcccggccgtctactccggtgacctcgacatcttcgcgtcg
caggccgcccaggactggcttcgcctgctcgaggcattcgagcaaccgcatcgatccggc
ctggtccgggccgcggccaccacgatgttcttcggcgagaccgcgacgagcttgtacgcc
ggcggcgaggagctcaccgaccggactgggcagaccttgcgggcctgggcagaccgcctg
cgaaccagtggagtggcggcggtcttcgaggcagcgcaggtcaatggcatgaccgagcgc
gtactggcttggcgcaacggcgagcgggacatgaccgacctcgcgcatctggcagagctg
ctgcacgagaccgcgcatcgggaagggttcgggctgcctgccctgctcgactggctacgc
gaggagtgcgccggccggggccgcacgacggagcgaacccgtcggctcgacagcgacgcc
gccgccgtacagatcatgactgtgtgggtcagcaagggcctgcagtacccggtcgtctat
ctgcccttcgcgttcaaccgtcacgtcgtcgaggacaccgagctgattctcttccacgag
gacggcgagcggtgtctcgacctcggcggcaaggggcaccgtggccacaaagccaaccag
cgacagtggcgggccgaggaggccggtgacgacatccggctgacctatgtcgcgctgacc
cgtgcccagtcacaggtcgtggcctggtgggcgccgtcgtgggacgaggtcaacggagga
atctcccggctgctgcgcacccgcaagcagggcgaaccggtcgtgcccgacaccctggaa
agagcagcgtccgacgacgatgtactggtctggctgcggcgctggcagcaggccggcggc
cccgtgatcgaggaatcgctgatcgcagagcatgtcgagcccgtacctgaggagttgccc
ggcggactcgcggtcggaaccttctcccgtgaggtcgacatcgcctggcgccgtacgtcg
tactcgggactgatccgggcggctgaccagcaggcgagcggtgtggtcagcgagcaggag
gaaagccaactggaggacgagtctgtagatccggtaccagcacctggggccgctcagacc
gatgcactgccgtctccgatggacggtctgccggcgggagccacgttcggatcactcgtg
catgccgtgctcgaagaggcggacccccaatcgcccgatctgcacgccgagctggccgga
agggtccgcgagcagttgcgattctggcgagtcgacgtgacccccgatgcgctggccacg
gcgatgctgccacttcacagcacccccctcggtccgctcgttccggggctgaccctgggc
gatctgggccgagccgaccggctccgagagctcgacttcgagatcccgttggccgggggc
gatcacgcggtggcgaccgacgtacagctggcccagttggcgccgctgctgcgcacccac
ctgtcagccgacgacccgctccttgcgtacgccgaccggctcgaacagccactgctcggc
cgacagagcctgcgaggctacctgtccgggtcgatcgacgtcgtactgcgtgtccctcat
ggcgggagccatcggttcgtggtggtcgactacaagaccaaccggctcggcgatccagag
gaacccgccacctccgcggagtacgggcaggatcagctgggcgccgcgatgctgcactcc
gactatcccttgcaggcgatgctctactcggtggtgctgcaccgatacctccgctggcgg
ctcccggactatgaccccgaagtacatctcggtggggtgatctacctctatctgcgcggc
atgtgcggaccggacacacctctggtagatgggcacccagcaggggtgttcagttggccg
atgcccgcggcactagtgctggcactgtccgatctgctcgatgggagggcgacatga
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