Kribbella qitaiheensis: F1D05_11145
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Entry
F1D05_11145 CDS
T06749
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kqi
Kribbella qitaiheensis
Pathway
kqi03420
Nucleotide excision repair
kqi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F1D05_11145
03430 Mismatch repair
F1D05_11145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqi03400
]
F1D05_11145
Enzymes [BR:
kqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1D05_11145
DNA repair and recombination proteins [BR:
kqi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F1D05_11145
MMR (mismatch excision repair)
Other MMR factors
F1D05_11145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_30
DUF6011
Motif
Other DBs
NCBI-ProteinID:
QNE18346
UniProt:
A0A7G6WWI1
LinkDB
All DBs
Position
complement(2461348..2463477)
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AA seq
709 aa
AA seq
DB search
MSQSVSNITQSVAGKSADELLEALDPEQRAVATALHGPVVVMAGAGTGKTRAITHRIAYG
VRTGTFDPARVLAVTFTQRAAGEMRGRLAQLGTNGVQARTFHSAALRQARWFWPKVFGGE
LPPIIDRKFPLLTEASNRCRVRVDTPALRDLAGEVEWAKVSNVRPDDYAKVAPQSGRALA
AFDPATIARVFAAYEDVKIERGRIDLEDVLLCAVALLAEDERVAAEIRRQYRTFVVDEYQ
DVSPLQQSLLDLWLGGREDVCVVGDPAQTIYSWAGADPENLVRFAQRHPSAAVIKLIRDY
RSTPQIVDVANKVLDAAGPTGLPGRVTLRSQRDAGPTPTYREYPDEVAEADAVARAIARL
QDSGTALRDIAVLFRTNAQSENFEQALAERKIPAVLKGAERFFERPEIRQAAMLLRGQAK
AGGASDDDLVETVTGILGGAGWTLDPPEGKGAVRDRWESLSALVTMTSDFAKANPKAGFG
DLMAELDRRASIQHAPLAEGVTLATLHAAKGLEWGCVFIVGAHEGTLPITYAQTPAQVEE
ERRLFYVGVTRAKDQLSVSWSTSRSPGGRGTRGPTRFLDPIGVRTSSRPSEWESSSPRST
TPRVSRSDKPIPKCRVCGRGLLEAAARKLGRCEDCPGSMDQKLYDALLEWRAERAAEEGM
PAFVIFTDATLIAIAETRPTDERELIRIPGIGRTKVTKYGEPVINICTR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtccgtgagtaacatcacgcagtccgtcgcaggcaagtccgccgacgaactg
ctcgaggccctcgaccccgagcagcgagccgtcgcgaccgccttgcacggacctgtcgtc
gtgatggccggtgccggcaccggcaagacccgcgcgatcacccaccggatcgcgtacggc
gtgcgcacgggcaccttcgatccggcccgggtgctggccgtgaccttcacccagcgcgcg
gccggtgagatgcgcggccggctcgcccagctcgggacgaacggcgtccaggcccgcacc
ttccactcggccgcgctccggcaggcgagatggttctggccgaaggtcttcggtggcgag
ctgccaccgatcatcgaccggaagttcccgttgctgaccgaggcgtccaaccgctgccgc
gtccgggtcgacaccccggcgctgcgcgacctggccggcgaggtggagtgggccaaggtg
agcaacgtccgccccgacgactacgcgaaggtcgcgccgcagtccggccgggcgctggcc
gcgttcgacccggcgacgatcgcgcgcgtcttcgcggcgtacgaggacgtcaagatcgag
cgcggccggatcgacctggaggacgtgctgctctgcgcggtcgcgctgctggccgaggac
gagcgggtcgccgccgagatccgccggcagtacaggaccttcgtcgtcgacgagtatcag
gacgtctcgcccctgcagcagagcctgctcgacctctggctgggtggtcgcgaggatgtc
tgcgtggtcggcgacccggctcagaccatttactcgtgggccggcgccgacccggagaac
ctggtccgcttcgcccagcgccatccgtccgccgccgtgatcaagctgatccgcgactac
cgctccaccccgcagatcgtcgacgtggcgaacaaggtgctcgacgcggccggaccgacc
ggtctgcccggccgggtcaccttgcgatcccagcgtgacgcgggcccgaccccgacgtac
cgggagtatccggacgaggtcgccgaggcggacgccgtcgcccgcgcgatcgcccggctc
caggactccggtacggcgctgcgcgacatcgcggtgctgttccgtaccaacgcgcagtcg
gagaacttcgagcaggcgctggccgagcggaagatccccgccgtactgaagggtgccgag
cgattcttcgagcggcccgagatccggcaggccgcgatgctcctccgtggccaggcgaag
gcgggcggcgcgtccgacgacgacttggtcgagaccgtcaccggcatcctcggtggcgcc
ggctggacgctcgacccacccgagggcaagggcgcggtccgcgatcgctgggagtcgctg
agcgcgctcgtcacgatgacgtccgacttcgccaaggcgaatcccaaggccgggttcggt
gatctgatggccgagctggaccggcgcgcgtcgatccagcacgcgccgctggccgagggg
gtcacgctcgccaccctgcacgcggcgaagggcctggagtggggctgcgtcttcatcgtc
ggcgcccacgaggggacactgccgatcacctacgcccagacaccggcccaggtcgaggag
gagcggcggttgttctacgtcggggtgacccgcgcgaaggatcagttgtcggtcagttgg
tcgacgtcccgctcaccaggtggccgcggcacccgcgggccgacccggttcctcgacccg
atcggggtccgcacctcctcccggccgagcgagtgggagtcgtcgtcgccgcgatcgacc
acgccgcgggtgtcgcgctcggacaagccgatcccgaagtgccgcgtctgcggccgcggc
ctgctcgaggctgccgcccgcaaactcggccgctgcgaggactgcccgggctcgatggac
cagaagctgtacgacgccctgctcgaatggcgggccgagcgcgccgccgaggagggcatg
cccgcgttcgtcattttcaccgacgccaccctgatcgcgatcgcggaaacccgcccgaca
gatgagcgcgagctgatccgcatccccggcatcggccgaaccaaggtcacgaagtacggc
gaaccagtaatcaacatctgcacccgctga
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