Kribbella qitaiheensis: F1D05_20650
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Entry
F1D05_20650 CDS
T06749
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kqi
Kribbella qitaiheensis
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kqi03032
]
F1D05_20650 (gyrB)
03400 DNA repair and recombination proteins [BR:
kqi03400
]
F1D05_20650 (gyrB)
Enzymes [BR:
kqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
F1D05_20650 (gyrB)
DNA replication proteins [BR:
kqi03032
]
Prokaryotic type
DNA Topoisomerases
F1D05_20650 (gyrB)
DNA repair and recombination proteins [BR:
kqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1D05_20650 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
QNE19878
UniProt:
A0A7G6X0W3
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Position
4399944..4401983
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AA seq
679 aa
AA seq
DB search
MTDEPTEIDETTSADITGIEEAPLGEIQSSVVEKEYDASAIQVLEGLDAVRKRPGMYIGS
TGERGLHHLVYEVVDNAVDEALAGYCDKILITLLSDGGVRVVDNGRGIPVDIVESEGKPA
VTVVLTVLHAGGKFGGGGYKVSGGLHGVGVSVVNALSGRLQVDVRKNAKIYTQSFTVGVP
DADLAEVGTSDSDGTTITFWPSADVFETTVYSFETLSTRLREYAFLNKGLELVIRDERPD
HTPDGEPVEQSFRYEDGLVDYVKYLTGIRETVHRDVIAFEAAQGDDSLSLEVAMQWSGSF
QESVHTFANTINTHEGGTHEEGFRAALTTLVNSFGEDQGMIKKKEDRLTGDDIREGLTAI
ISVKLGNPQFEGQTKTKLGNTEVKGFVQRVVNDRLGAWFEQNPAEGREIIRKATAAASAR
IAARKARDLARNRKGLLGGGGLPGKLSDCQSTNPEECEVYIVEGDSAGGSAKGGRDPKYQ
AILPIRGKILNVEKARIDRVLQNNEVLAIISALGTGIHEDFDEEKLRYHKIVLMADADVD
GQHIRTLLLTLLFRFMRPLIERGHVYAAQPPLYKIRWSNQTPELAYTEREKDGLLEAGFE
AGKKLPKDNAIQRYKGLGEMNAQELWETTMDPANRVLLQITLDDAARADETFATLMGDDI
EARRNFIQRNAKDVRFLDI
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgagccgaccgagatcgacgaaacaacgtccgcagacatcaccggcatcgaa
gaagcacctctcggtgagattcagtccagcgtcgtcgagaaggaatacgacgccagcgcg
atccaggtcctcgaaggcctcgacgcggtccgtaagcggccgggtatgtacatcgggtcg
accggtgagcgcggtctgcaccacctcgtctacgaggtcgtcgacaacgcggtggacgag
gcactcgccgggtactgcgacaagattctgatcaccttgctgtccgacggcggtgttcgc
gtcgtcgacaacggccgtggcatcccggtcgacatcgtcgagtccgagggtaagccggcc
gtcaccgtcgtgctgaccgtgctgcacgccggcggaaagttcggcggcggcgggtacaag
gtctccggaggcctgcacggtgtcggtgtctcggtggtgaacgcgctgtccggccggctc
caggtggacgtccgcaagaacgcgaagatctacacccagtccttcaccgtcggcgtcccc
gatgccgacctggccgaggtgggcacgtcggactccgacggcaccacgatcaccttctgg
ccgagcgccgacgtcttcgagacgacggtctactcattcgagacgctctcgacccggctg
cgtgagtacgcgttcctgaacaagggccttgagttggtgatccgcgacgagcgtccggac
cacacccccgacggcgagccggtcgagcagtcgttcaggtacgaggacggcctggtcgac
tacgtgaagtacctgaccggcatccgcgagacggtgcaccgtgacgtgatcgcgttcgag
gcggcccagggcgacgacagcctgagcctcgaggtggcgatgcagtggagcggttcgttc
caggaatccgtgcacaccttcgcgaacacgatcaacacccacgagggcggcacccacgaa
gaggggttccgcgccgcgctgacgacgctggtcaactcgttcggcgaggaccagggcatg
atcaagaagaaagaggacaggctcaccggtgacgacatccgggaaggcctgaccgcgatc
atctcggtcaagctcggcaacccgcagttcgagggccagacgaagaccaagctcggcaac
accgaggtgaagggtttcgtccagcgggtcgtcaatgaccggctcggcgcctggttcgag
cagaacccggccgagggtcgcgagatcatccgtaaggccaccgcggccgcgagtgcccgg
atcgccgcccgcaaggcgcgtgacctggcccgcaaccgcaagggcctgctcggtggcggc
ggtctgccgggcaagctgtccgactgccagtcgacgaaccccgaggagtgcgaggtctac
atcgtcgagggtgactcggccggtggctccgccaagggtggtcgcgacccgaagtaccag
gcgatcctgccgatccggggcaagatcctgaacgtcgagaaggcgcggatcgaccgggtc
ctgcagaacaacgaagtactggcgatcatctcggcactcggcaccggcatccacgaggac
ttcgacgaagagaagctgcggtaccacaagatcgtgctgatggccgacgcggacgtcgac
ggtcagcacatccgtacgctgctgctcaccctgctgttccggttcatgcggccgctgatc
gagcgcggtcacgtgtacgccgcgcagccgccgctgtacaagatccgctggagcaaccag
acgcccgagctcgcctacaccgagcgggagaaggacggcctgctcgaggccggcttcgag
gccggcaagaagctgccgaaggacaacgcgatccagcgctacaagggtctgggcgagatg
aacgcgcaggaactgtgggagaccacgatggacccggccaaccgggtcctgctgcagatc
accctggacgacgcggcccgggccgacgagaccttcgcgaccctgatgggtgacgacatc
gaggcccgtcggaacttcatccagcgcaacgccaaggacgtccggttccttgacatctga
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