Kribbella qitaiheensis: F1D05_23575
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Entry
F1D05_23575 CDS
T06749
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kqi
Kribbella qitaiheensis
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kqi03032
]
F1D05_23575 (topA)
03400 DNA repair and recombination proteins [BR:
kqi03400
]
F1D05_23575 (topA)
Enzymes [BR:
kqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
F1D05_23575 (topA)
DNA replication proteins [BR:
kqi03032
]
Prokaryotic type
DNA Topoisomerases
F1D05_23575 (topA)
DNA repair and recombination proteins [BR:
kqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
F1D05_23575 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
QNE23112
UniProt:
A0A7G6XA47
LinkDB
All DBs
Position
5002075..5004771
Genome browser
AA seq
898 aa
AA seq
DB search
MIVESPKKARMIAGFLGAGYVVESSFGHIRDLPKGADEIPAKYKGLPWARLGVNIEDHFD
PLYVVPADKKQQIRKLKDLLKDADELYLATDEDREGEAIAWHLLDELKPKIPVKRMVFHE
ITPKAIQDAVGSARSINDALVDAQEARRILDRLYGYEVSPVLWKKVMPKLSAGRVQSVAI
RMVVDRERERIAFRSASYWDLDATLDAGEGKTPRLFPSRLVSVDSKRVAQGRDFASTGEL
KSQNTVHLDQSTATALAAALQDSQFTVRSIESKPYTRKPYAPFRTTTLQQEAGRKLNMSA
SQTMQIAQRLYENGNITYMRTDSVTLSDTAITAARSQVRELYGASYLPDKPRVYTSKVKN
AQEAHEAIRPAGEQFQTPAQTGLSGAEYRLYELIWMRTIASQMKDAAGNSVSIKIDAKAT
SGENCEFTSSGRVITFHGFLKAYVEGADDPSAETDDRETQIPDVSQGDVLPASEVLASGH
ETKPPARFTEATLIAQLEDREIGRPSTYASILGTIQARGYVYKKGNALVPAWLAFAVVRL
LEEHFTRLVDYAFTASMEDVLDEVAAGNLQREGVLGRFYFGEEGIEGLQSMVSDLGDIDA
REMSTFQVGPQDSGIVVRVGRYGPYVEDKDEQRANVPEDLPPDELTVEKALELLSQPSGV
EIELGVAPESGLQVVAKAGRFGPYVTEVLPEDAPKSAKPRTGSLLSSMTLDTVTLADALR
LLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLQTEDQMFDITLEEALKIYAEPK
QRGRRAAAPPLKELGEDPASGQPVVVKEGRFGPYVTDGETNATLRKDDSVDTISLLRAAE
LLADKRARGPVKKTAKKAPAKKTTAKKTAAKKATTKKTAAKKTTAKKATVKKAAAEKS
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtcgagtcgccgaaaaaggcgcggatgatcgccggctttttgggcgccgggtac
gtggtggagtccagtttcggccacatccgcgacctgccgaagggcgccgacgagatcccg
gcgaagtacaagggcctgccctgggcgcgcctcggggtcaacatcgaggaccacttcgac
ccgctgtacgtcgtaccggcggacaagaagcagcagatccgcaagctgaaggacctgctc
aaggacgccgacgagctctacctggccacagatgaggaccgcgagggcgaggccatcgcg
tggcacctgctggacgagctgaagccgaagatcccggtcaagcggatggtcttccacgag
atcaccccgaaggcgatccaggacgcggtcggcagcgcgcggagcatcaacgacgcgctg
gtcgacgcccaggaggcccggcgcatcctggaccggctgtacggctacgaggtcagcccg
gtgctgtggaagaaggtcatgccgaagctgtcggcgggccgggtgcagtcggtcgcgatc
cggatggtggtcgaccgcgagcgggagcggatcgcgttccgcagcgcttcctactgggac
ctggacgccaccctcgacgcaggtgaggggaagacgccccggctgttcccgtcgcgactg
gtctcggtggacagcaagcgcgtggcacagggacgcgacttcgcctcgaccggtgagctg
aagagccagaacacggttcacctggaccagtcgacggcgaccgcgctggccgccgcgctg
caggactcgcagttcaccgtccggtcgatcgagtccaagccgtacacccgcaagccgtac
gcgccgttccggaccaccacgctgcagcaggaggccgggcgcaagctgaacatgtccgcc
tcccagacgatgcagatcgcgcagcggctgtacgagaacggcaacatcacctatatgcgt
accgacagcgtcacgctgtcggacaccgcgatcaccgcggcccggtcccaggtccgcgag
ctgtacggcgcgtcgtacctgccggacaagccgcgggtctacacctccaaggtgaagaac
gcgcaggaggcgcacgaggcgatccggcccgccggtgagcagttccagaccccggcgcag
accgggctgagcggcgcggagtaccggctctacgaactgatctggatgcggacgatcgcg
tcccagatgaaagacgcggccggtaacagcgtgtccatcaagatcgacgcgaaggccacg
tcgggggagaactgcgagttcacctcgtcgggtcgcgtgatcaccttccacggcttcctg
aaggcgtacgtcgagggtgctgacgacccgtccgccgagaccgacgaccgggagacgcag
atcccggacgtgtcccagggtgacgtgctgccggcgagcgaggtgctcgcgtccggacac
gagaccaagccgccggcccgcttcacggaagcgacgctgatcgcgcaactggaagaccgc
gagatcggccggccgtcgacgtacgcgtcgatcctgggcacgatccaggcccgcgggtat
gtgtacaagaagggcaacgcgctggttccggcgtggctggccttcgccgtggtccggctg
ctggaggagcacttcacccggctggtcgactacgcgttcaccgcctcgatggaggacgtg
ctcgacgaagtcgcggccggaaacctgcagcgcgaaggggtgctcggccggttctacttc
ggcgaggaaggcatcgaaggcctgcagtcgatggtgagtgatctgggtgacatcgatgcc
agggagatgtccacgttccaggtcggtccgcaggacagcgggatcgtcgttcgcgtcggc
cggtacgggccgtatgtcgaggacaaggacgagcagcgcgccaacgtgccggaggatctg
ccgccggacgaactgactgtcgaaaaggcgctggagctgctcagccagccgtccggggtc
gagatcgagctgggggtcgcgcccgagagcgggctgcaggtcgtcgccaaggccggccgt
ttcggtccgtacgtgaccgaggtgctgcccgaggacgcgccgaagagcgccaaaccgcgg
accgggtcgctgctgtcgtcgatgacgctggacacggtgacgctggcggacgcgctgcgg
ctgctgtcgctgccgcgggtggtcggtaaggacccggagtccggggacgagatcaccgcg
cagaacggccgctacggtccgtacctgaagaagggcacggactcgcggtcgctgcagacc
gaggaccagatgttcgacatcaccctcgaggaagcgctgaagatctacgccgagccgaag
cagcgtggacgccgggctgccgcgccgccgctgaaggagctgggcgaggacccggcgtcg
ggtcagccggtggtggtgaaggagggccgcttcggtccttatgtcaccgatggcgagacg
aatgcgacgctgcgcaaggacgactcggtcgacaccatctcgctgctgcgggcggccgag
ctgctcgcggacaagcgggctcgtgggccggtgaagaagaccgcgaagaaggcgcctgcg
aagaagacgaccgccaagaagacagcggccaagaaggcgacgaccaagaagaccgccgcc
aagaagacgaccgcgaagaaggcgaccgtcaagaaggctgccgccgagaagtcctga
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