Kribbella qitaiheensis: F1D05_37735
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Entry
F1D05_37735 CDS
T06749
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kqi
Kribbella qitaiheensis
Brite
KEGG Orthology (KO) [BR:
kqi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqi03400
]
F1D05_37735
Enzymes [BR:
kqi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
F1D05_37735
DNA repair and recombination proteins [BR:
kqi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
F1D05_37735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
QNE22595
UniProt:
A0A7G6X8N0
LinkDB
All DBs
Position
complement(8027353..8030448)
Genome browser
AA seq
1031 aa
AA seq
DB search
MSATRIETTAYGAAALERLREVVAGLKAEDPMKPVTLLLPNNLAGVAARRFLAVAGIAGL
YLATLPRLAEQLASGLLAPRRPATRPIVAATWRTALSKAPGVFAEVADHPATIQALAAAH
RELRDLSEPVLEKVSSASVLGPDLIRLHRHVTGELSPDWYDETDLLETAAARAAENPAIV
AELGALVLYLPQELTQAEAGFVEALGTAAADLTVIVGLTDVKRADRAVRRSLERIGIDLP
TSISKNYPVATEVLNASDADDEVRCVVRAVVASLARTPAHRIAVLYSAATPYARLLHEHL
AAAKIEVNGPGTRPVHERALGRTLLEVLALVDRDLPRADLFRALANAPTRDFTGERIPVP
QWERMSRVAGVVRGDDWDDRLARYAESERRTADQEAAAEDSRPAAVRRAQYNAETAERLH
QFASELRRRLQAVALFETWSELAAAVLELFQDLLGDTDSLPVEEQYAAVAVEGSLHGLST
LDELGTPAGLTVLRDVLDLELQQSLPRVGTFGTGVLVAPMSTSIGLSVDIVFVVGLSEDL
YPGRVHEDALLPHRVREAAAPELASFRDRLDEKQRHLLAAFSAGSQRVVASFPRGDLRRS
SRRLPTRWLLGTLRSLTGDHALAATEWDRAEYGDRPLTSASYAGSLTTAGMAATEQDWQV
RALSAGLALPDQVVERARVLLRARSGDEFTRFDGNLSGVPGLPDYASEDRVASPTLLESY
ATCPHAYFVERLLQVEPLESPEDLLVISPLQVGNLIHNSLDAFVSRLAGSLPEYGEEWSA
EQRSLLLAIGAELADRFEAEGLTGHPRLWQRERLRILGDLLVLLADDDRWRFEHDASVVA
SELRFGFDGEPAVEIPIPSGRVLLRGSADKVDLGRDGTIYVTDVKTGGFSRYEAIESDPV
AAGTKLQLPVYAYAARARLGEESTPVEAAYWFVRKGGRRIPVPLTDEVEARYVDTLEVIV
SSIASGQFPAKAPEVPDFLWVQCPYCNPDGIGHSGVRTRWERKRQDPELERLVRLIDPGA
LPAFEEVALDE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcgacccggatcgagaccacggcgtacggcgcggccgcgttggagcggctgcgt
gaggtcgtggcgggcctgaaggccgaggacccgatgaagccggtcaccctgttgctgccc
aacaacctggccggtgtggccgcacggcgttttctggccgtcgccggcatcgccgggctc
tatctggcaacgctgccccgcttggccgaacagctcgcctccggcctgctcgcaccgcgt
cgtcccgcaacccgcccgatcgtggcagcgacctggcgtactgcgctgtcgaaggcgccc
ggggtcttcgcggaggtcgccgaccatccggccacgatccaagcgcttgctgcagcccat
cgggagctgcgcgatctgagcgagccggtccttgagaaagtgtcctcagcctcagttctc
ggccccgatctgattcggcttcatcgccatgtcaccggtgagttgtcgccggattggtac
gacgagaccgacttgctggagactgcggccgcgagggcggctgagaatcctgcaatcgtt
gccgagctcggtgcgctggtgctctacctgccgcaggaactgacgcaggccgaagccggg
ttcgtcgaagcactcgggacggccgcagccgatctgaccgtgatcgtcggactgaccgac
gtgaagcgcgccgatcgcgccgtacggcgatcgctggagcggatcggcatcgatctgccg
acgtccatctccaagaactatccggtcgcgaccgaggtgctcaacgcctccgacgccgac
gacgaggtccgctgcgtcgtgcgagccgtggtcgcctccctcgcccgtacgccggcccac
cggatcgcggtgctctactcggcagccactccgtatgcccggctgctgcacgagcatctc
gcggccgccaagatcgaggtcaacggtccggggacgaggccggtccacgagcgagcgctg
ggtcggacgttgctggaagttctcgcattggtcgaccgcgatctcccccgcgcggacttg
ttccgggcgctggccaacgctccgactcgggacttcaccggcgaacggatcccggtgccg
cagtgggagcggatgtcgcgggtcgccggagtggttcgcggtgacgactgggacgaccgg
ctggcgcgctatgcggagtcagaacgtcgtacggccgatcaagaggcagcggctgaggat
tcccggcccgccgcagtacggcgtgcgcagtacaacgcggagacggcggagcggcttcat
cagttcgcttcggagctgcgtcgacggcttcaggcggtcgcgttgttcgagacttggtcg
gagctggccgccgcggtacttgagctcttccaggatctgttgggagacaccgattcgttg
ccggtcgaggagcaatacgcagcggttgcggtggagggatctctgcatggcttgtcgacc
ctcgacgagctcggtacgccggccggcctgaccgtactgcgcgatgtcctcgatctggag
ttgcagcaatcgctgccgcgagtgggcacgttcggcaccggagtgctggtggcgccgatg
tccacgagcatcgggctctcggtggacatcgtgttcgtggtcgggttgtcggaagacctt
tatccggggcgggttcacgaggacgcgctactcccccatcgggtccgggaggccgccgcg
ccggagctggcatcgttccgcgaccggctggacgagaagcagcggcatctgctcgcggcg
ttctcggccggttcgcaacgggtcgtcgcgtcgttcccgcgtggcgatcttcgccgatcc
agccgtcggctaccgacgcgctggttgctcggtacgttgcggtcgttgaccggcgaccac
gcgcttgccgcgaccgagtgggaccgagcggagtacggcgatcggccgctcacctccgcg
tcgtacgccggttcgttgaccacggcagggatggcggcgacggagcaggactggcaggtg
cgggcgttgtcggcggggcttgcgttgcccgaccaggtggtcgagcgggctcgggtgctg
ttgcgggcgcgttcgggcgacgagttcacgcggttcgacgggaatctgtcgggggtgccc
ggcctgccggactacgcgtcggaggatcgggttgcctcgccgacattgctggagtcgtat
gcgacctgtccgcacgcgtacttcgtcgaacggttgctgcaggtggagccgcttgagtcg
ccggaagatctcctggtgatctcgcctctgcaggtggggaatctgatccacaacagcctg
gacgcgttcgtgtcccggctggccggatcgctgcctgagtacggcgaggaatggtcggcc
gagcagcgatcgctgttgctggcgatcggtgcggagctggccgatcggttcgaggccgag
gggctgaccgggcatccgcggttgtggcagcgggagcggctgcggatcctgggcgatctg
ctggtgctgcttgccgatgatgatcgctggcggttcgagcatgacgcgtcggtggtcgcg
agcgagctgcggttcggcttcgatggggagccggcggttgagatcccgattccatcgggg
cgggtgctgttgcggggctcggcggacaaggtcgatctcggccgggacggcacgatctac
gtcaccgatgtgaagaccggtggcttctcgcggtacgaggcgatcgagtcggatccggtg
gcggccgggaccaagttgcagctgccggtctatgcgtatgcggcgcgcgctcggctgggc
gaagagtcgacgcccgtggaggcggcgtactggttcgtgcgcaagggcggccggcggatt
ccggtgccgctgacggacgaggtcgaggccaggtacgtggacacgctggaggtgatcgtg
tcgtcgatcgcttccggccagttcccggcgaaggcacccgaagtaccggacttcctttgg
gtgcaatgtccgtactgcaaccccgacggaatcggccacagcggggttcgaaccagatgg
gaacggaaacgccaggatccagagctggaacgcttggtccgactgatcgacccaggcgcg
ctacctgcattcgaggaggtggccctcgatgagtga
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