Klebsiella quasipneumoniae: AVR78_03795
Help
Entry
AVR78_03795 CDS
T04389
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kqu
Klebsiella quasipneumoniae
Pathway
kqu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AVR78_03795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqu03400
]
AVR78_03795
Enzymes [BR:
kqu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AVR78_03795
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AVR78_03795
DNA repair and recombination proteins [BR:
kqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AVR78_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-B_box
zf-C2H2_OTU1_C
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMR13542
LinkDB
All DBs
Position
complement(3643953..3644762)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHPVLAHLGPEPLSDAFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSRDECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYSRK
GEPCRICGTPVVGTKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaccagccgtcgcggcattgagccgcacctggttggc
gccaccattctgcacgccgtcgtgcgcaacggacggttgcgctggccggtttccgaagag
atttatcgcctgagcgacgttccggtgctcagcgtgcgacgtcgcgccaaatatttgctt
ctggaactcccggacggctggatcatcgtccatcttgggatgtcggggagcctgcgcatc
ctgagcgaagagctgcctgcggaaaaacacgatcacgttgatctggttatgagtaacggt
aaagttctgcgctataccgatccgcgccgctttggcgcctggctatggaccaaagagctg
gaaggccacccggtgctggcgcatctggggccggaaccgctaagcgatgccttcaacgcc
gactatctccagcagaaatgcgcgaagaagaaaaccgcgatcaaaccctggctgatggat
aacaagctggtggtgggcgtcggcaatatctacgccagtgaatcgctgttctccgccggg
atccaccctgacaggctggcgtcctcgctgtcgcgggacgagtgcgagcagttggtgaag
gtgattaagctagtcctgctgcgctcgatagagcagggcggcaccacgctgaaggacttc
ctgcaaagcgatggcaagcccggttattttgcccaggagctacaggtctatagccgcaag
ggcgaaccctgccggatctgcggcacgccggtcgtcgggaccaagcatgcccagcgggcg
accttttattgccgccagtgtcagaaatag
DBGET
integrated database retrieval system
