Klebsiella quasipneumoniae: AVR78_05410
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Entry
AVR78_05410 CDS
T04389
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kqu
Klebsiella quasipneumoniae
Pathway
kqu03420
Nucleotide excision repair
kqu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AVR78_05410
03430 Mismatch repair
AVR78_05410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kqu03400
]
AVR78_05410
Enzymes [BR:
kqu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AVR78_05410
DNA repair and recombination proteins [BR:
kqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AVR78_05410
MMR (mismatch excision repair)
Other MMR factors
AVR78_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AMR13832
UniProt:
A0A1C1ELM6
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All DBs
Position
3971107..3973269
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQASRELLKDKALAGRAASALQRFMELIDALAQETTDMPLHVQ
TDRVIKDSGLRAMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRATVSRPVNHQRLG
APIAESDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLEEV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgaagccgtagcggcc
tcgcgcaccaacatgctggttctggcaggggcgggcagtggtaagacgcgcgttctggtg
caccgtatcgcctggctgctgagcgtggagaactgctcgccgtattctattatggcggtg
acctttaccaacaaagcggcggcagagatgcgccaccgtatcggccagctgatgggcacc
acccagggcggcatgtgggtgggcaccttccacggcctggcccaccgcctgctgcgcgcg
caccatctggacgccaacctgccgcaggatttccaaatccttgatagcgaagaccagctg
cgcctgctgaagcgtctgattaaggcgatgaacctcgatgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacagccagaaagatgaagggctgcgcccgcatcatattcag
agctacggcaacccggtcgagcagacctggcagaaggtctatcaggcctatcaggaagcc
tgcgatcgcgccgggctggtggacttcgccgaactgctgctgcgcgcccacgagctgtgg
ctgaataagccgcatatcctccagcactaccgtgagcggttcaccaatatcctcgtcgac
gaattccaggataccaacaacattcagtacgcgtggatccgcctgttggcgggcgatacc
ggcaaggtgatgatcgtcggcgatgacgatcagtcgatttacggctggcgcggcgcgcag
gtcgagaacattcagcgtttccttaacgattttcccggtgcggaaaccatccgccttgag
cagaactatcgctcgaccagcaacatcctcagcgccgccaacgccctgattgaaaacaac
aacggtcgcctgggcaagaagctatggaccgacggcgccgacggcgagccgatctcgctg
tactgcgctttcaacgatctcgacgaagcacgcttcgtagtgaaccggataaaaacctgg
caggagaacggcggggcgctggagcagtgcgccatcctctatcgcagcaacgcccagtcg
cgcgtgctggaagaggcgcttctgcaggccagtatgccgtaccgcatctatggcggcatg
cgcttcttcgaacgccaggaaatcaaagacgcgctctcgtacctgcgtctgatcgccaac
cgtaacgacgatgcggcgtttgagcgcgtagtcaatacgccgacccgcggcatcggcgac
cgcacgctggacgtggtgcgccagacgtcacgcgatcgtcagctgacgctgtggcaggcc
agccgtgagctgctgaaagataaagcgctggccggtcgcgccgccagcgccctgcagcgc
tttatggagctgattgacgcgctggcgcaggagaccaccgatatgccgctgcacgtccag
accgatcgggtgattaaagactccgggctgcgcgcgatgtacgagcaggagaaaggcgag
aagggtcagacccgtattgaaaacttagaggagctggtgacggcgacgcgccagtttagc
tacaacgaagaagatgaagatctgatgccgctgcaggcgttcctctcccacgccgcgctg
gaagcgggcgagggacaggcggatacctggcaggacgcggttcagctgatgaccctgcac
tcggcgaaagggctggagttcccgcaggtgttcatcgtcggcgtcgaggaggggatgttc
ccgagccagatggcccttgatgaaggtggccgcctggaagaagagcgtcgtctggcctac
gttggcgtgacgcgcgccatgcagaagctgacgctgacctacgcggaaacccgccgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttattggagagctgccgcaggagtgt
gtagaagaagtgcgtctgcgggctacggtgagccgcccggtaaaccatcagcgactgggc
gcgccgattgccgagagcgataccggctacaaattaggccagcgcgtacggcatccgaag
tttggcgaaggcaccatcgtcaacctcgaaggcagcggcgagcacagccggctgcaggtg
gcttttcagggtcaggggatcaaatggctggtcgcggcttacgcccggctcgaggaagtg
taa
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