Klebsiella quasipneumoniae: AVR78_05685
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Entry
AVR78_05685 CDS
T04389
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kqu
Klebsiella quasipneumoniae
Pathway
kqu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AVR78_05685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kqu03021
]
AVR78_05685
03400 DNA repair and recombination proteins [BR:
kqu03400
]
AVR78_05685
Enzymes [BR:
kqu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AVR78_05685
Transcription machinery [BR:
kqu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AVR78_05685
DNA repair and recombination proteins [BR:
kqu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AVR78_05685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AMR13876
UniProt:
A0A0V9HMV4
LinkDB
All DBs
Position
4026753..4030976
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLRNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDSVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDDNGEFVAKTSLKDTTIGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEANSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIKL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGAVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTAGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARIPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVGATFSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGELPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcttcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaaacctgagcgtgacggccttttctgcgcccgt
atctttgggccggtaaaagactatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcatgtccgactgcgcacatctggttcctgaaatctctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatatcgaacgtgtactgtac
tttgaatcctatgtggttatcgaaggtggcatgaccaacctcgaacgcaaccagattctg
acggaagaacagtacctggacgcgctggaagagttcggtgacgaattcgacgcgaagatg
ggtgcggaagcgatccaggcgctgctgcgcaatatggatctggagcaggagtgcgagcag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
attaagctgctggaagccttcgtacagtctggcaacaagccggagtggatgatcctgacc
gttctgccggtactgccgccagatctgcgtccgctggttccgctggatggcggtcgtttc
gcgacgtctgacctcaacgatctgtatcgtcgcgtgatcaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggatatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggtagatgccctgctggacaacggtcgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgcgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atctacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaagatg
gttgagcgcgaagaagctgtcgtttgggatatcctggacgaagtgatccgcgaacacccg
gttctgctgaaccgtgcgccgaccctgcaccgtctgggtattcaggcattcgaaccggtt
ctgatcgaaggtaaagccatccagctgcacccgctggtttgtgcggcatataacgccgac
ttcgatggtgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgacagtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagctgagcgtatttatcgcgccggc
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagacgacaat
ggtgagtttgtcgcgaaaaccagcctgaaagacacgaccattggccgtgccattctgtgg
atgatcgtaccgaaaggtctgccgttctctatcgtgaaccaggcgctcggtaagaaagcg
atctccaagatgctgaacacctgttaccgtattctgggcctgaaaccgaccgttattttc
gcggaccagacgatgtacaccggctttgcttacgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgaaatcatcagcgaagcggaagcggaa
gttgctgagattcaggaacagttccagtccggtctggtgaccgcgggcgaacgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggtcaggaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgctgcacagattcgtcagctg
gccggtatgcgtggtctgatggcgaagccggatggctccatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacgcacggtgcgcgt
aaaggtctggcggataccgcactgaaaacagcgaactccggttacctgactcgtcgtctg
gtcgacgttgcccaggacctggtcgtcactgaagacgactgcggcaccctggaaggcatc
accatgacgccggttatcgaaggtggcgacgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgtgactgcggaagacgtgctgaagccgggtaccgcggatattctggttccacgc
aacacgctgctgcacgagcactggtgtgacctgctggaagcgaactccgttgactccgtc
aaagtgcgttccgttgtatcctgtgacaccgactttggtgtatgtgcgcactgctatggt
cgtgacctggcgcgtggccacatcatcaacaaaggtgaggctatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatcaagctc
agcaacgcgaagtcggttgtgaactccagcggtaaactggttatcacttcccgtaacacc
gagctgaaactgatcgacgaattcggtcgtaccaaagagagctataaagtgccttacggt
gcggttatggcgaaaggcgacggtgagcaggttgccggcggtgaaaccgtcgcaaactgg
gatccgcacaccatgccggttatcaccgaagtgagtggtttcatccgcttcactgacatg
atcgacggccagaccattactcgtcagaccgacgaactgaccggtctgtcttcgctggtg
gttctggactctgcagaacgtaccgcaggtggtaaagatctgcgtccggcgctgaaaatc
gttgatgctcagggcaacgacgttctgattccaggcaccgatatgccggctcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctctggtgacacc
ctggcgcgtattccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgc
gttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggtatcatttccttcggtaaagaaaccaaagggaaacgtcgcctggttatcaccccggta
gacggtagcgaaccgtacgaagagatgattccgaaatggcgtcagctcaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcgccgcacgacatt
ctgcgtctgcgtggcgtacatgctgtgacccgttatattgttaacgaagtccaggacgta
taccgtctgcagggcgttaagattaacgataaacacatcgaagttatcgttcgtcagatg
ctgcgtaaagccaccatcgaaagcgcaggcagctccgacttcctcgaaggcgagcaggtg
gaatactcccgcgtcaagatcgcgaaccgcgaactggaagcgaacggcaaagtgggcgca
acgttctcccgcgatctgctgggtatcaccaaagcgtctttggccaccgagtccttcatc
tccgcggcatcgttccaggagaccactcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggccggt
accggttatgcgtaccaccaggatcgtatgcgccgtcgcgctgctggcgaactgccggcg
gcaccgcaggtgagcgtggaagaagcatctgccaacctggcagagctgctgaacgcaggt
ctgggcggttctgacaacgattaa
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