Klebsiella quasipneumoniae: AVR78_08495
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Entry
AVR78_08495 CDS
T04389
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
kqu
Klebsiella quasipneumoniae
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kqu03021
]
AVR78_08495
Transcription machinery [BR:
kqu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
AVR78_08495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
DksA-like_N
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AMR14381
UniProt:
A0A8H9ZN24
LinkDB
All DBs
Position
complement(4600604..4603510)
Genome browser
AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPAIGENRLYSRNDSPITRVMFNPGDT
ITSHEGWQLHVDKVHEENGLLSYTGTRLDTQEANVTLREVLLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKFQSEQYRMPWSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIVVPETLQHQWLVEMLRRFNLRFSLFDDERYAEAQH
DAYNPFETEQLVICSLDFVRRSKQRLEHLCDAEWDLMVVDEAHHLVWSEEAPSREYQAIE
QLAERVPGILLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQQNYRPVADAVALLL
AGNKLSDSELNTLGDLIGEQDIEPLLQAANSDREDAQAARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIRLPLPTQYQTAIKVSGIMGARKTAEERARDMLYPEQIYQEFEGD
TGTWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASNLVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTVYDSVHNELINYLAAPEST
DGFDDLIKSCRQQHDALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTSLIAFSM
NLFDIVGINQDDRGENLIVLTPSDHMLVPDFPGLPEDGCTITFERDVALSREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLLELIYVVEAQAPKQLQLNRFLPATP
VRMLLDKNGNNLAGQVEFESFNRQLSAVNRHTGSKLVNAVQQDVHAILQQGEAQIAKAAQ
GLIDAARSEADDKLTAELSRLEALKAVNPNIRDDELAAIESNRQQVLEALGQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggattagcgacacagagagcgaactaggattaggg
acggtggtagcgctggatgcgcgcatggtcactctccttttccccgccatcggcgaaaac
cgtctgtactcacgcaacgattccccgatcactcgcgtgatgtttaacccgggcgacacc
attaccagccacgaaggctggcagctccacgttgacaaagtgcatgaagagaatgggctg
ctgtcctacaccggcacccgcctcgatacccaggaagcgaacgtcaccctgcgtgaagtg
ctgctcgacagcaaactggtgttcagcaagccgcaggaccgtctgttcgccggccaaatc
gaccgcatggaccgctttgccctgcgctaccgcgcgcgcaagttccagagcgagcagtac
cgcatgccgtggagcggcctgcgcggccagcgcaccagcctgatcccgcatcagctgaac
atcgcccacgacgtgggccgtcgtcacgcgccacgcgtcctgctggccgatgaagtgggc
ttaggtaaaaccatcgaagccgggatgatcctgcaccagcagctgctctccggcgccgcc
gagcgcgtactgatcgtggtcccggaaacccttcagcaccagtggctggtggagatgctg
cgccgcttcaacctgcgcttctcgctgtttgacgacgagcgctacgccgaagcgcagcat
gacgcctacaacccgttcgaaaccgaacagctggtgatctgctctttagacttcgtgcgc
cgcagcaagcagcgcctggagcacctgtgcgacgccgagtgggacctgatggtggtcgat
gaagcgcaccacctggtgtggagcgaagaggcgccgagccgcgaatatcaagccattgaa
cagctggccgagcgcgtgccgggcattctgctgctgaccgcgacgccggaacagctgggg
atggagagccactttgcgcgcctgcgcctgctggatccgaaccgcttccacgatttcgcg
cagtttgtcgaagaacagcagaactaccgtccggtggccgacgctgtcgctctgctgctg
gcgggcaacaagctgagcgatagcgaactcaataccctcggcgatctaatcggcgagcag
gatatcgagccgctgctgcaggccgccaacagcgatcgcgaagacgctcaggccgcgcgc
caggagctggtctcgatgctgatggaccgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtcaaaggtttcccgaaacgcgagctgcacaccattcgcctgccgctg
ccgacccagtaccagaccgccatcaaagtatccggcatcatgggcgcccgcaaaaccgcg
gaagagcgcgcgcgcgacatgctctacccggagcagatctatcaggaatttgaaggcgat
accggcacctggtggaactttgacccgcgcgtcgagtggctgatgggctacctgaccagc
catcgctcgcagaaggtactggtgatttgcgccaaagccgccaccgcgctccagctggag
caggtgctgcgcgagcgcgaaggtatccgcgccgccgtgttccatgaagggatgtcgatt
atcgaacgcgaccgcgccgcggcgtggtttgctgaagaagacaccggcgcccaggtgctg
ctgtgctccgagatcggctccgaaggacgcaacttccagttcgccagcaacctggtgatg
ttcgatctgccgtttaacccggatctgctggagcagcgtatcggccgtctcgaccgtatc
ggccaggcgcacgatatccagatccacgtcccgtacctggaaaagaccgcgcagtcggtg
ctggtgcgctggtatcacgaaggcctcgacgcctttgaacatacctgcccgaccggacgg
accgtctacgacagcgtccataacgagctgatcaactaccttgcggcgccggaatccacc
gacggctttgacgatctgatcaaatcctgccgccagcagcatgacgctctgaaagcgcag
ctggagcagggccgcgaccgtctgctggagatccactccaacggcggcgagaaagcccag
gccctggcggagagcatcgaagagcaggatgacgacaccagcctgatcgccttctcgatg
aacctgttcgatatcgtcggcatcaaccaggacgaccgcggggaaaacctgatcgtcctc
accccttccgaccatatgctggtgccggatttcccgggcctgccggaggacggttgcacc
atcaccttcgagcgtgacgtggcgctgtcccgtgaagacgcgcagttcatcacctgggaa
cacccgctgatccgcaacggcctcgacctgatcctctccggcgataccggcagcagtact
atttccctgctgaagaacaaggcgctgccggtcggcactctgctgctggagctgatctac
gtggtcgaagcgcaggcgccgaagcagctgcagctcaaccgcttcctgccggcgaccccg
gttcgcatgctgctggataaaaacggcaacaacctcgccggccaggtggagtttgaaagc
ttcaaccgccagctgagcgcggtcaatcgccacaccggcagcaagctggtcaacgcggtg
cagcaggacgttcatgccattctgcagcagggcgaagcgcagatcgccaaggcggcgcag
gggctgatcgacgcggcgcgtagtgaagccgacgataagctgacggcggagctctcccgt
ctggaagcgctgaaggcggtcaacccgaacatccgtgacgacgaactggcggcgattgaa
agcaaccgccagcaggtgctggaggcgctgggacaggccggatggcgtctggacgcgctg
cgtctgatcgtcgtcactcaccagtaa
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