Klebsiella quasipneumoniae: AVR78_10380
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Entry
AVR78_10380 CDS
T04389
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
kqu
Klebsiella quasipneumoniae
Brite
KEGG Orthology (KO) [BR:
kqu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kqu03032
]
AVR78_10380
03036 Chromosome and associated proteins [BR:
kqu03036
]
AVR78_10380
03400 DNA repair and recombination proteins [BR:
kqu03400
]
AVR78_10380
DNA replication proteins [BR:
kqu03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AVR78_10380
Chromosome and associated proteins [BR:
kqu03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AVR78_10380
DNA repair and recombination proteins [BR:
kqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AVR78_10380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMR14729
UniProt:
A0A1C1EV11
LinkDB
All DBs
Position
5000820..5001092
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSQLIDKIAAGADISKAAAGRALDALIASVTESLQAGDDVALVGFGTFAVKERAARTG
RNPQTGKEITIAAAKVPGFRAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaatctcaactgattgacaaaattgctgcgggtgcggacatttctaaagctgca
gctggacgtgcgttagatgctttaatcgcttctgttactgaatctctgcaggctggggat
gacgttgcgctggtaggtttcggtacctttgctgttaaagaacgtgccgcccgtactggt
cgcaacccacaaacaggtaaagaaattactatcgctgccgcaaaagtgccgggcttccgt
gctggtaaagcgctgaaagacgcggtgaactga
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